RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TRBV6-5A0A0K0K1A5 114 aa13.93□□□□□ -0.18
PNKP-209ENST00000596726 GAS8-AS1O95177 125 aa13.93□□□□□ -0.18
PNKP-209ENST00000596726 RAB4AP20338 218 aa13.93□□□□□ -0.18
PNKP-209ENST00000596726 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
PNKP-209ENST00000596726 A0A1B0GUV1 79 aa13.92□□□□□ -0.18
PNKP-209ENST00000596726 CRPP02741 224 aa13.92□□□□□ -0.18
PNKP-209ENST00000596726 KRTAP10-1P60331 282 aa13.92□□□□□ -0.18
PNKP-209ENST00000596726 IFITM2Q01629 132 aa13.92□□□□□ -0.18
PNKP-209ENST00000596726 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
PNKP-209ENST00000596726 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 NCR2O95944 276 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 GCSHP23434 173 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 AMTP48728 403 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 MIAQ16674 131 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 AMN1Q8IY45 258 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 C20orf203Q8NBC4 194 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 MRAP2Q96G30 205 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 KRTAP17-1Q9BYP8 105 aa13.91□□□□□ -0.18
PNKP-209ENST00000596726 IGLV5-52A0A0A0MRZ9 124 aa13.9□□□□□ -0.18
PNKP-209ENST00000596726 LECT2O14960 151 aa13.9□□□□□ -0.18
PNKP-209ENST00000596726 NDUFA5Q16718 116 aa13.9□□□□□ -0.18
PNKP-209ENST00000596726 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
PNKP-209ENST00000596726 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
PNKP-209ENST00000596726 RPS10P46783 165 aaKnown RBP13.88□□□□□ -0.19
PNKP-209ENST00000596726 A0A1B0GW15 77 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 I3L3M4 83 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 UBE2L6O14933 153 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 POLR2KP53803 58 aaKnown RBP13.87□□□□□ -0.19
PNKP-209ENST00000596726 KRTAP26-1Q6PEX3 210 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 TMEM70Q9BUB7 260 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 ST20Q9HBF5 79 aa13.87□□□□□ -0.19
PNKP-209ENST00000596726 PMCHP20382 165 aa13.86□□□□□ -0.19
PNKP-209ENST00000596726 REG3AQ06141 175 aa13.86□□□□□ -0.19
PNKP-209ENST00000596726 PNRC1Q12796 327 aaPredicted RBP13.86□□□□□ -0.19
PNKP-209ENST00000596726 FAM104BQ5XKR9 115 aa13.86□□□□□ -0.19
PNKP-209ENST00000596726 CLPSL2Q6UWE3 100 aa13.86□□□□□ -0.19
PNKP-209ENST00000596726 APCSP02743 223 aa13.85□□□□□ -0.19
PNKP-209ENST00000596726 DNAH8Q96JB1 4490 aa13.85□□□□□ -0.19
PNKP-209ENST00000596726 A0A1B0GXF2 115 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 SMKR1H3BMG3 65 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 H7C423 109 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 PPP1R2P9O14990 202 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 CAMPP49913 170 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 XGP55808 180 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
PNKP-209ENST00000596726 NRACQ8N912 160 aa13.84□□□□□ -0.19
PNKP-209ENST00000596726 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.83□□□□□ -0.2
PNKP-209ENST00000596726 TRBV27A0A0K0K1C4 114 aa13.83□□□□□ -0.2
PNKP-209ENST00000596726 TSHBP01222 138 aa13.83□□□□□ -0.2
PNKP-209ENST00000596726 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
PNKP-209ENST00000596726 PPP1R17O96001 155 aa13.82□□□□□ -0.2
PNKP-209ENST00000596726 ESDP10768 282 aa13.82□□□□□ -0.2
PNKP-209ENST00000596726 MRPL54Q6P161 138 aaKnown RBP13.82□□□□□ -0.2
PNKP-209ENST00000596726 KRTAP4-5Q9BYR2 181 aa13.82□□□□□ -0.2
PNKP-209ENST00000596726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.81□□□□□ -0.2
PNKP-209ENST00000596726 IGKV2-29A2NJV5 120 aaPredicted RBP13.81□□□□□ -0.2
PNKP-209ENST00000596726 HBBP68871 147 aa13.81□□□□□ -0.2
PNKP-209ENST00000596726 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
PNKP-209ENST00000596726 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 S100A8P05109 93 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 C14orf177Q52M58 125 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 UQCC3Q6UW78 93 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 Q8N1X5 172 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 ANAPC16Q96DE5 110 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 PCLOQ9Y6V0 5065 aa13.8□□□□□ -0.2
PNKP-209ENST00000596726 IGLV10-54A0A075B6I4 117 aa13.79□□□□□ -0.2
PNKP-209ENST00000596726 VCYO14598 125 aa13.79□□□□□ -0.2
PNKP-209ENST00000596726 FGF6P10767 208 aa13.79□□□□□ -0.2
PNKP-209ENST00000596726 SUMO2P61956 95 aaKnown RBP13.79□□□□□ -0.2
PNKP-209ENST00000596726 AMMECR1LQ6DCA0 310 aa13.79□□□□□ -0.2
PNKP-209ENST00000596726 ATP5L2Q7Z4Y8 100 aa13.79□□□□□ -0.2
PNKP-209ENST00000596726 USP17L23D6RBM5 183 aa13.78□□□□□ -0.2
PNKP-209ENST00000596726 MT-ND4LP03901 98 aa13.78□□□□□ -0.2
PNKP-209ENST00000596726 TRBV24-1A0A075B6N3 115 aa13.77□□□□□ -0.21
PNKP-209ENST00000596726 F8W036 122 aa13.77□□□□□ -0.21
PNKP-209ENST00000596726 ZNF25P17030 456 aaPredicted RBP13.77□□□□□ -0.21
PNKP-209ENST00000596726 TMEM218A2RU14 115 aa13.76□□□□□ -0.21
PNKP-209ENST00000596726 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
PNKP-209ENST00000596726 CKS2P33552 79 aa13.76□□□□□ -0.21
PNKP-209ENST00000596726 RNASEKQ6P5S7 137 aaKnown RBP13.76□□□□□ -0.21
PNKP-209ENST00000596726 C20orf78Q9BR46 151 aa13.76□□□□□ -0.21
PNKP-209ENST00000596726 FAM30AQ9NZY2 134 aa13.76□□□□□ -0.21
PNKP-209ENST00000596726 RPL32P62910 135 aaKnown RBP13.75□□□□□ -0.21
PNKP-209ENST00000596726 ABCA13Q86UQ4 5058 aa13.74□□□□□ -0.21
PNKP-209ENST00000596726 PRSS1P07477 247 aa13.74□□□□□ -0.21
PNKP-209ENST00000596726 Q6ZSA8 131 aa13.74□□□□□ -0.21
PNKP-209ENST00000596726 MRPL52Q86TS9 123 aaKnown RBP13.74□□□□□ -0.21
PNKP-209ENST00000596726 C7orf77A4D0Y5 90 aa13.73□□□□□ -0.21
PNKP-209ENST00000596726 D6R8Y8 96 aa13.73□□□□□ -0.21
PNKP-209ENST00000596726 TNFRSF6BO95407 300 aa13.73□□□□□ -0.21
PNKP-209ENST00000596726 FAT1Q14517 4588 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 PPBPP02775 128 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 FCER1GP30273 86 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 LINC01620Q4KN68 170 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 BTF3L4Q96K17 158 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 KIR2DL4Q99706 377 aa13.72□□□□□ -0.21
PNKP-209ENST00000596726 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms