RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 NTF3P20783 257 aa9.4□□□□□ -0.9
XRCC1-205ENST00000595789 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
XRCC1-205ENST00000595789 SMIM12Q96EX1 92 aa9.4□□□□□ -0.9
XRCC1-205ENST00000595789 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
XRCC1-205ENST00000595789 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
XRCC1-205ENST00000595789 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
XRCC1-205ENST00000595789 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
XRCC1-205ENST00000595789 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
XRCC1-205ENST00000595789 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
XRCC1-205ENST00000595789 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
XRCC1-205ENST00000595789 IFNA1P01562 189 aa9.38□□□□□ -0.91
XRCC1-205ENST00000595789 TRGC1P0CF51 173 aa9.38□□□□□ -0.91
XRCC1-205ENST00000595789 GNG4P50150 75 aa9.38□□□□□ -0.91
XRCC1-205ENST00000595789 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
XRCC1-205ENST00000595789 DPH3Q96FX2 82 aa9.38□□□□□ -0.91
XRCC1-205ENST00000595789 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 AMTP48728 403 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 COTL1Q14019 142 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 NUDT10Q8NFP7 164 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 NUDT11Q96G61 164 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 CNFNQ9BYD5 112 aa9.37□□□□□ -0.91
XRCC1-205ENST00000595789 GAGE12HA6NDE8 117 aa9.36□□□□□ -0.91
XRCC1-205ENST00000595789 UBE2L6O14933 153 aa9.36□□□□□ -0.91
XRCC1-205ENST00000595789 CTRLP40313 264 aa9.36□□□□□ -0.91
XRCC1-205ENST00000595789 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
XRCC1-205ENST00000595789 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
XRCC1-205ENST00000595789 PHOX2AO14813 284 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 PDE6DO43924 150 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 SULT1A2P50226 295 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 COX6A2Q02221 97 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
XRCC1-205ENST00000595789 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
XRCC1-205ENST00000595789 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
XRCC1-205ENST00000595789 TRAV26-2A0A0B4J265 109 aa9.33□□□□□ -0.92
XRCC1-205ENST00000595789 TWIST1Q15672 202 aa9.33□□□□□ -0.92
XRCC1-205ENST00000595789 Q6ZNX1 250 aa9.33□□□□□ -0.92
XRCC1-205ENST00000595789 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
XRCC1-205ENST00000595789 BIN3Q9NQY0 253 aa9.33□□□□□ -0.92
XRCC1-205ENST00000595789 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
XRCC1-205ENST00000595789 NDUFS6O75380 124 aaKnown RBP9.32□□□□□ -0.92
XRCC1-205ENST00000595789 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
XRCC1-205ENST00000595789 RPL39LQ96EH5 51 aaKnown RBP9.32□□□□□ -0.92
XRCC1-205ENST00000595789 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
XRCC1-205ENST00000595789 TEX46H3BTG2 121 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 K7EN84 100 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 NCR2O95944 276 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 BCL2P10415 239 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
XRCC1-205ENST00000595789 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
XRCC1-205ENST00000595789 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
XRCC1-205ENST00000595789 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
XRCC1-205ENST00000595789 H7C423 109 aa9.3□□□□□ -0.92
XRCC1-205ENST00000595789 FOXI1Q12951 378 aa9.3□□□□□ -0.92
XRCC1-205ENST00000595789 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
XRCC1-205ENST00000595789 EIF5AL1Q6IS14 154 aaKnown RBP9.3□□□□□ -0.92
XRCC1-205ENST00000595789 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
XRCC1-205ENST00000595789 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
XRCC1-205ENST00000595789 RNASE7Q9H1E1 156 aaKnown RBP9.3□□□□□ -0.92
XRCC1-205ENST00000595789 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
XRCC1-205ENST00000595789 IGKV2-24A0A0C4DH68 120 aa9.29□□□□□ -0.92
XRCC1-205ENST00000595789 FAM231BA6NCW3 169 aa9.29□□□□□ -0.92
XRCC1-205ENST00000595789 FGF6P10767 208 aa9.29□□□□□ -0.92
XRCC1-205ENST00000595789 PRR3P79522 188 aaKnown RBP9.29□□□□□ -0.92
XRCC1-205ENST00000595789 AMMECR1LQ6DCA0 310 aa9.29□□□□□ -0.92
XRCC1-205ENST00000595789 RNF213Q63HN8 5207 aa9.28□□□□□ -0.92
XRCC1-205ENST00000595789 A0A096LNI7 61 aa9.28□□□□□ -0.92
XRCC1-205ENST00000595789 SDHAF1A6NFY7 115 aa9.28□□□□□ -0.92
XRCC1-205ENST00000595789 RNASEKQ6P5S7 137 aaKnown RBP9.28□□□□□ -0.92
XRCC1-205ENST00000595789 STPG4Q8N801 248 aa9.28□□□□□ -0.92
XRCC1-205ENST00000595789 APCSP02743 223 aa9.27□□□□□ -0.93
XRCC1-205ENST00000595789 ODF1Q14990 250 aa9.27□□□□□ -0.93
XRCC1-205ENST00000595789 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
XRCC1-205ENST00000595789 TRBV6-5A0A0K0K1A5 114 aa9.26□□□□□ -0.93
XRCC1-205ENST00000595789 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
XRCC1-205ENST00000595789 ESDP10768 282 aa9.26□□□□□ -0.93
XRCC1-205ENST00000595789 TEX261Q6UWH6 196 aa9.26□□□□□ -0.93
XRCC1-205ENST00000595789 LYPD6BQ8NI32 183 aa9.26□□□□□ -0.93
XRCC1-205ENST00000595789 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
XRCC1-205ENST00000595789 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
XRCC1-205ENST00000595789 TAGLN2P37802 199 aaKnown RBP9.25□□□□□ -0.93
XRCC1-205ENST00000595789 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
XRCC1-205ENST00000595789 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
XRCC1-205ENST00000595789 I3L3M4 83 aa9.24□□□□□ -0.93
XRCC1-205ENST00000595789 XCL1P47992 114 aa9.24□□□□□ -0.93
XRCC1-205ENST00000595789 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
XRCC1-205ENST00000595789 SMIM15Q7Z3B0 74 aa9.24□□□□□ -0.93
XRCC1-205ENST00000595789 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
XRCC1-205ENST00000595789 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 CCL25O15444 150 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 TSHBP01222 138 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 PMCHP20382 165 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 FAM231DQ6ZW35 169 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
XRCC1-205ENST00000595789 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
XRCC1-205ENST00000595789 GATCO43716 136 aaKnown RBP9.22□□□□□ -0.93
XRCC1-205ENST00000595789 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
XRCC1-205ENST00000595789 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
XRCC1-205ENST00000595789 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms