RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 LINC01551Q86U37 167 aa8.8□□□□□ -1
SHKBP1-208ENST00000595726 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 TWIST1Q15672 202 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 CT83Q5H943 113 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 TEX261Q6UWH6 196 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 RMI2Q96E14 147 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 KLK12Q9UKR0 248 aa8.79□□□□□ -1
SHKBP1-208ENST00000595726 KRTAP9-6A0A140TA67 174 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 ZNF727A8MUV8 499 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 MPV17L2Q567V2 206 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 TMEM97Q5BJF2 176 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 KCNIP4Q6PIL6 250 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 RASL11AQ6T310 242 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 UBE2WQ96B02 151 aa8.78□□□□□ -1
SHKBP1-208ENST00000595726 A8MWL6 223 aa8.77□□□□□ -1.01
SHKBP1-208ENST00000595726 TMEM262E9PQX1 116 aa8.77□□□□□ -1.01
SHKBP1-208ENST00000595726 ELOBQ15370 118 aa8.77□□□□□ -1.01
SHKBP1-208ENST00000595726 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
SHKBP1-208ENST00000595726 TRBV25-1A0A075B6N4 114 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 FOXA3P55318 350 aaPredicted RBP8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 PKIAP61925 76 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 ATRAIDQ6UW56 229 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 NIT2Q9NQR4 276 aa8.76□□□□□ -1.01
SHKBP1-208ENST00000595726 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 C9JQL5 133 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 SRSF3P84103 164 aaKnown RBP8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 C15orf54Q8N8G6 183 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 OSTCQ9NRP0 149 aa8.75□□□□□ -1.01
SHKBP1-208ENST00000595726 HIGD1CA8MV81 97 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 ANGP03950 147 aaKnown RBP8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 Q0VG73 95 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 GAGE6Q13070 117 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 ENHOQ6UWT2 76 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 SMIM15Q7Z3B0 74 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 ISOC2Q96AB3 205 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
SHKBP1-208ENST00000595726 CRPP02741 224 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 PRSS1P07477 247 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 RPL23P62829 140 aaKnown RBP8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 RBX1P62877 108 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 V9GYV3 84 aa8.73□□□□□ -1.01
SHKBP1-208ENST00000595726 FAM231BA6NCW3 169 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 USP17L23D6RBM5 183 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 PEA15Q15121 130 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
SHKBP1-208ENST00000595726 A0A1B0GUT8 65 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 KRTAP10-8P60410 259 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 ADIRFQ15847 76 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 TMEM243Q9BU79 118 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 SMDT1Q9H4I9 107 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 PRR34Q9NV39 138 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 NAT8Q9UHE5 227 aa8.71□□□□□ -1.02
SHKBP1-208ENST00000595726 COTL1Q14019 142 aa8.7□□□□□ -1.02
SHKBP1-208ENST00000595726 MIAQ16674 131 aa8.7□□□□□ -1.02
SHKBP1-208ENST00000595726 CLPSL2Q6UWE3 100 aa8.7□□□□□ -1.02
SHKBP1-208ENST00000595726 DPH3Q96FX2 82 aa8.7□□□□□ -1.02
SHKBP1-208ENST00000595726 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
SHKBP1-208ENST00000595726 A6NJY4 79 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 AMTP48728 403 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 NUP35Q8NFH5 326 aa8.69□□□□□ -1.02
SHKBP1-208ENST00000595726 IGLV4-60A0A075B6I1 120 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 PHOX2AO14813 284 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 RNF185Q96GF1 192 aa8.68□□□□□ -1.02
SHKBP1-208ENST00000595726 A0A087WYN8 130 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 TRBV6-5A0A0K0K1A5 114 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 UBE2L6O14933 153 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 HLA-DQA1P01909 254 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 REG3AQ06141 175 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 KRTAP26-1Q6PEX3 210 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 NAT8BQ9UHF3 227 aa8.67□□□□□ -1.02
SHKBP1-208ENST00000595726 SMIM27A0A1W2PRY6 76 aa8.66□□□□□ -1.02
SHKBP1-208ENST00000595726 NCR2O95944 276 aa8.66□□□□□ -1.02
SHKBP1-208ENST00000595726 RAB4AP20338 218 aa8.66□□□□□ -1.02
SHKBP1-208ENST00000595726 RIGQ13278 110 aa8.66□□□□□ -1.02
SHKBP1-208ENST00000595726 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
SHKBP1-208ENST00000595726 APCSP02743 223 aa8.65□□□□□ -1.02
SHKBP1-208ENST00000595726 RPS10P46783 165 aaKnown RBP8.65□□□□□ -1.02
SHKBP1-208ENST00000595726 MRAP2Q96G30 205 aa8.65□□□□□ -1.02
SHKBP1-208ENST00000595726 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms