RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 C6orf223Q8N319 242 aa11.65□□□□□ -0.54
LTBP4-209ENST00000594116 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
LTBP4-209ENST00000594116 DAZ3Q9NR90 486 aaKnown RBP11.65□□□□□ -0.54
LTBP4-209ENST00000594116 RYR1P21817 5038 aa11.65□□□□□ -0.55
LTBP4-209ENST00000594116 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 PRSS47A8MTI9 375 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
LTBP4-209ENST00000594116 ESRGQ1W209 222 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
LTBP4-209ENST00000594116 TMEM70Q9BUB7 260 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 GTSF1LQ9H1H1 148 aa11.64□□□□□ -0.55
LTBP4-209ENST00000594116 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
LTBP4-209ENST00000594116 TNP2Q05952 138 aa11.63□□□□□ -0.55
LTBP4-209ENST00000594116 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
LTBP4-209ENST00000594116 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
LTBP4-209ENST00000594116 TMEM97Q5BJF2 176 aa11.61□□□□□ -0.55
LTBP4-209ENST00000594116 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
LTBP4-209ENST00000594116 I3L3M4 83 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 VCYO14598 125 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 TRGC2P03986 189 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 MAP1LC3AQ9H492 121 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 Q9H8V8 135 aa11.6□□□□□ -0.55
LTBP4-209ENST00000594116 MRPS16Q9Y3D3 137 aaKnown RBP11.6□□□□□ -0.55
LTBP4-209ENST00000594116 TTC32Q5I0X7 151 aa11.59□□□□□ -0.55
LTBP4-209ENST00000594116 LELP1Q5T871 98 aa11.59□□□□□ -0.55
LTBP4-209ENST00000594116 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
LTBP4-209ENST00000594116 ABCA13Q86UQ4 5058 aa11.58□□□□□ -0.56
LTBP4-209ENST00000594116 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
LTBP4-209ENST00000594116 TSHBP01222 138 aa11.58□□□□□ -0.56
LTBP4-209ENST00000594116 PMCHP20382 165 aa11.58□□□□□ -0.56
LTBP4-209ENST00000594116 COTL1Q14019 142 aa11.58□□□□□ -0.56
LTBP4-209ENST00000594116 C16orf90A8MZG2 172 aa11.57□□□□□ -0.56
LTBP4-209ENST00000594116 IQCJQ1A5X6 159 aa11.57□□□□□ -0.56
LTBP4-209ENST00000594116 HSPG2P98160 4391 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 CDK2AP2O75956 126 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 Q8N8P6 123 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 KRTAP1-5Q9BYS1 174 aa11.56□□□□□ -0.56
LTBP4-209ENST00000594116 NXT2Q9NPJ8 142 aaKnown RBP11.56□□□□□ -0.56
LTBP4-209ENST00000594116 TRBV25-1A0A075B6N4 114 aa11.55□□□□□ -0.56
LTBP4-209ENST00000594116 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
LTBP4-209ENST00000594116 LOC389332A0A1B0GUA5 103 aa11.55□□□□□ -0.56
LTBP4-209ENST00000594116 TCAPO15273 167 aa11.55□□□□□ -0.56
LTBP4-209ENST00000594116 ESDP10768 282 aa11.54□□□□□ -0.56
LTBP4-209ENST00000594116 BTF3P20290 206 aaKnown RBP11.54□□□□□ -0.56
LTBP4-209ENST00000594116 AMTP48728 403 aa11.54□□□□□ -0.56
LTBP4-209ENST00000594116 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
LTBP4-209ENST00000594116 CHCHD7Q9BUK0 85 aa11.54□□□□□ -0.56
LTBP4-209ENST00000594116 TRAV8-6A0A0B4J262 113 aa11.53□□□□□ -0.56
LTBP4-209ENST00000594116 LINC01546A6NGU7 62 aa11.53□□□□□ -0.56
LTBP4-209ENST00000594116 K7EMI3 77 aa11.53□□□□□ -0.56
LTBP4-209ENST00000594116 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
LTBP4-209ENST00000594116 WFDC10BQ8IUB3 73 aa11.53□□□□□ -0.56
LTBP4-209ENST00000594116 LRP1BQ9NZR2 4599 aa11.53□□□□□ -0.56
LTBP4-209ENST00000594116 FCER1GP30273 86 aa11.52□□□□□ -0.57
LTBP4-209ENST00000594116 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
LTBP4-209ENST00000594116 KRTAP4-5Q9BYR2 181 aa11.52□□□□□ -0.57
LTBP4-209ENST00000594116 PRSS3P2Q8NHM4 247 aa11.51□□□□□ -0.57
LTBP4-209ENST00000594116 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
LTBP4-209ENST00000594116 Q0VG73 95 aa11.5□□□□□ -0.57
LTBP4-209ENST00000594116 NIT1Q86X76 327 aa11.5□□□□□ -0.57
LTBP4-209ENST00000594116 H7C423 109 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 SIVA1O15304 175 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 DNAH10OSP0CZ25 163 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 PKIAP61925 76 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BKO60814 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BJP06899 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BOP23527 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BBP33778 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BDP58876 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BCP62807 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 LAGE3Q14657 143 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST2H2BEQ16778 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.48□□□□□ -0.57
LTBP4-209ENST00000594116 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BHQ93079 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BNQ99877 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 HIST1H2BMQ99879 126 aa11.48□□□□□ -0.57
LTBP4-209ENST00000594116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
LTBP4-209ENST00000594116 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
LTBP4-209ENST00000594116 C1orf196B1AJZ1 125 aa11.47□□□□□ -0.57
LTBP4-209ENST00000594116 LINC00614P0C842 121 aa11.47□□□□□ -0.57
LTBP4-209ENST00000594116 RAB5BP61020 215 aa11.47□□□□□ -0.57
LTBP4-209ENST00000594116 GAGE6Q13070 117 aa11.47□□□□□ -0.57
LTBP4-209ENST00000594116 UBE2L6O14933 153 aa11.46□□□□□ -0.57
LTBP4-209ENST00000594116 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.57
LTBP4-209ENST00000594116 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.57
LTBP4-209ENST00000594116 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
LTBP4-209ENST00000594116 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
LTBP4-209ENST00000594116 MPV17L2Q567V2 206 aa11.45□□□□□ -0.58
LTBP4-209ENST00000594116 Q6ZRN7 208 aaPredicted RBP11.45□□□□□ -0.58
LTBP4-209ENST00000594116 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms