RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TMEM241Q24JQ0 296 aa9.1□□□□□ -0.95
APOC1-208ENST00000592535 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
APOC1-208ENST00000592535 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
APOC1-208ENST00000592535 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
APOC1-208ENST00000592535 NIT2Q9NQR4 276 aa9.1□□□□□ -0.95
APOC1-208ENST00000592535 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
APOC1-208ENST00000592535 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
APOC1-208ENST00000592535 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
APOC1-208ENST00000592535 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 S100A1P23297 94 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 MIAQ16674 131 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 Q6ZSA8 131 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 LINC00269Q8N2A0 174 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 PRR34Q9NV39 138 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 NAT8Q9UHE5 227 aa9.08□□□□□ -0.96
APOC1-208ENST00000592535 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
APOC1-208ENST00000592535 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
APOC1-208ENST00000592535 LINC01551Q86U37 167 aa9.07□□□□□ -0.96
APOC1-208ENST00000592535 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
APOC1-208ENST00000592535 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
APOC1-208ENST00000592535 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
APOC1-208ENST00000592535 A8MWL6 223 aa9.06□□□□□ -0.96
APOC1-208ENST00000592535 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
APOC1-208ENST00000592535 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
APOC1-208ENST00000592535 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
APOC1-208ENST00000592535 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 APOC3P02656 99 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 REG3AQ06141 175 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
APOC1-208ENST00000592535 COTL1Q14019 142 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 CT83Q5H943 113 aa9.05□□□□□ -0.96
APOC1-208ENST00000592535 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
APOC1-208ENST00000592535 AMTP48728 403 aa9.04□□□□□ -0.96
APOC1-208ENST00000592535 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
APOC1-208ENST00000592535 CLRN3Q8NCR9 226 aa9.04□□□□□ -0.96
APOC1-208ENST00000592535 GFRA4Q9GZZ7 299 aa9.04□□□□□ -0.96
APOC1-208ENST00000592535 IGLV10-54A0A075B6I4 117 aa9.03□□□□□ -0.96
APOC1-208ENST00000592535 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
APOC1-208ENST00000592535 UBE2L6O14933 153 aa9.03□□□□□ -0.96
APOC1-208ENST00000592535 SVBPQ8N300 66 aa9.03□□□□□ -0.96
APOC1-208ENST00000592535 ISOC2Q96AB3 205 aa9.03□□□□□ -0.96
APOC1-208ENST00000592535 PRSS1P07477 247 aa9.02□□□□□ -0.97
APOC1-208ENST00000592535 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
APOC1-208ENST00000592535 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
APOC1-208ENST00000592535 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
APOC1-208ENST00000592535 C7orf77A4D0Y5 90 aa9.01□□□□□ -0.97
APOC1-208ENST00000592535 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
APOC1-208ENST00000592535 SNAPINO95295 136 aa9.01□□□□□ -0.97
APOC1-208ENST00000592535 ADIRFQ15847 76 aa9.01□□□□□ -0.97
APOC1-208ENST00000592535 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
APOC1-208ENST00000592535 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
APOC1-208ENST00000592535 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
APOC1-208ENST00000592535 A0A1B0GUT8 65 aa9□□□□□ -0.97
APOC1-208ENST00000592535 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
APOC1-208ENST00000592535 GAS8-AS1O95177 125 aa9□□□□□ -0.97
APOC1-208ENST00000592535 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
APOC1-208ENST00000592535 NCR2O95944 276 aa8.99□□□□□ -0.97
APOC1-208ENST00000592535 RHEBQ15382 184 aa8.99□□□□□ -0.97
APOC1-208ENST00000592535 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
APOC1-208ENST00000592535 TMEM242Q9NWH2 141 aa8.99□□□□□ -0.97
APOC1-208ENST00000592535 V9GYV3 84 aa8.99□□□□□ -0.97
APOC1-208ENST00000592535 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
APOC1-208ENST00000592535 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
APOC1-208ENST00000592535 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
APOC1-208ENST00000592535 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 APCSP02743 223 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 MT-ND4LP03901 98 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 DGAT2L7PQ6IED9 249 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 ANAPC16Q96DE5 110 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 RNF185Q96GF1 192 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 CTDSP1Q9GZU7 261 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
APOC1-208ENST00000592535 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
APOC1-208ENST00000592535 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
APOC1-208ENST00000592535 PMCHP20382 165 aa8.97□□□□□ -0.97
APOC1-208ENST00000592535 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
APOC1-208ENST00000592535 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 I3L3M4 83 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 FGF6P10767 208 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 RAB4AP20338 218 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.98
APOC1-208ENST00000592535 RNASEKQ6P5S7 137 aaKnown RBP8.96□□□□□ -0.98
APOC1-208ENST00000592535 AMN1Q8IY45 258 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 NUP35Q8NFH5 326 aa8.96□□□□□ -0.98
APOC1-208ENST00000592535 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
APOC1-208ENST00000592535 H7C423 109 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 TSHBP01222 138 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 RIGQ13278 110 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 MRAP2Q96G30 205 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 ST20Q9HBF5 79 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
APOC1-208ENST00000592535 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
APOC1-208ENST00000592535 GAGE12HA6NDE8 117 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms