RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 COTL1Q14019 142 aa12.16□□□□□ -0.46
PRKCSH-216ENST00000592445 SCO2A0A1W2PP80 73 aa12.15□□□□□ -0.46
PRKCSH-216ENST00000592445 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-216ENST00000592445 MED28Q9H204 178 aa12.15□□□□□ -0.46
PRKCSH-216ENST00000592445 PKIGQ9Y2B9 76 aa12.15□□□□□ -0.46
PRKCSH-216ENST00000592445 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
PRKCSH-216ENST00000592445 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
PRKCSH-216ENST00000592445 PFDN1O60925 122 aa12.13□□□□□ -0.47
PRKCSH-216ENST00000592445 FAM231BA6NCW3 169 aa12.12□□□□□ -0.47
PRKCSH-216ENST00000592445 AMMECR1LQ6DCA0 310 aa12.12□□□□□ -0.47
PRKCSH-216ENST00000592445 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
PRKCSH-216ENST00000592445 CACNG7P62955 275 aa12.11□□□□□ -0.47
PRKCSH-216ENST00000592445 MUC2Q02817 5179 aa12.1□□□□□ -0.47
PRKCSH-216ENST00000592445 A0A1B0GV50 99 aa12.1□□□□□ -0.47
PRKCSH-216ENST00000592445 IGLC6P0CF74 106 aa12.1□□□□□ -0.47
PRKCSH-216ENST00000592445 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
PRKCSH-216ENST00000592445 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-216ENST00000592445 RNASEKQ6P5S7 137 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-216ENST00000592445 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
PRKCSH-216ENST00000592445 LINC00526Q96FQ7 95 aa12.09□□□□□ -0.47
PRKCSH-216ENST00000592445 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
PRKCSH-216ENST00000592445 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
PRKCSH-216ENST00000592445 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-216ENST00000592445 FOXI1Q12951 378 aa12.08□□□□□ -0.48
PRKCSH-216ENST00000592445 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
PRKCSH-216ENST00000592445 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-216ENST00000592445 XCL1P47992 114 aa12.06□□□□□ -0.48
PRKCSH-216ENST00000592445 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
PRKCSH-216ENST00000592445 F2Z2F3 143 aa12.05□□□□□ -0.48
PRKCSH-216ENST00000592445 ZNF664Q8N3J9 261 aa12.05□□□□□ -0.48
PRKCSH-216ENST00000592445 CYTL1Q9NRR1 136 aa12.05□□□□□ -0.48
PRKCSH-216ENST00000592445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-216ENST00000592445 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-216ENST00000592445 NTF3P20783 257 aa12.04□□□□□ -0.48
PRKCSH-216ENST00000592445 KCNRGQ8N5I3 272 aa12.04□□□□□ -0.48
PRKCSH-216ENST00000592445 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
PRKCSH-216ENST00000592445 XKRY2A2RUG3 117 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 ZNF561-AS1K7EIQ3 104 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 MT-ND6P03923 174 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 FGF6P10767 208 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 SYCNQ0VAF6 134 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 Q6ZNX1 250 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 KRTAP9-2Q9BYQ4 174 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
PRKCSH-216ENST00000592445 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 H7C423 109 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 CCL25O15444 150 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 APCSP02743 223 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 OR5A1Q8NGJ0 315 aa12.02□□□□□ -0.49
PRKCSH-216ENST00000592445 ARPC5O15511 151 aa12.01□□□□□ -0.49
PRKCSH-216ENST00000592445 NCR2O95944 276 aa12.01□□□□□ -0.49
PRKCSH-216ENST00000592445 IFNA1P01562 189 aa12.01□□□□□ -0.49
PRKCSH-216ENST00000592445 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
PRKCSH-216ENST00000592445 GATD1Q8NB37 220 aa12□□□□□ -0.49
PRKCSH-216ENST00000592445 BTF3L4Q96K17 158 aa12□□□□□ -0.49
PRKCSH-216ENST00000592445 LINC00959A0A1B0GUT2 108 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 C19orf71A6NCJ1 209 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 TWIST1Q15672 202 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 C1orf137Q5JT78 98 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 PRR26Q8N8Z3 221 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
PRKCSH-216ENST00000592445 A0A1W2PNN7 141 aa11.98□□□□□ -0.49
PRKCSH-216ENST00000592445 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
PRKCSH-216ENST00000592445 ZNF25P17030 456 aaPredicted RBP11.98□□□□□ -0.49
PRKCSH-216ENST00000592445 ISOC2Q96AB3 205 aa11.98□□□□□ -0.49
PRKCSH-216ENST00000592445 A0A0U1RQV1 116 aa11.97□□□□□ -0.49
PRKCSH-216ENST00000592445 H2AFB1P0C5Y9 115 aa11.97□□□□□ -0.49
PRKCSH-216ENST00000592445 CAMPP49913 170 aa11.97□□□□□ -0.49
PRKCSH-216ENST00000592445 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
PRKCSH-216ENST00000592445 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
PRKCSH-216ENST00000592445 GNG4P50150 75 aa11.96□□□□□ -0.49
PRKCSH-216ENST00000592445 SS18Q15532 418 aa11.96□□□□□ -0.49
PRKCSH-216ENST00000592445 C11orf52Q96A22 123 aa11.96□□□□□ -0.49
PRKCSH-216ENST00000592445 BCL2P10415 239 aa11.95□□□□□ -0.5
PRKCSH-216ENST00000592445 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
PRKCSH-216ENST00000592445 DIRC1Q969H9 104 aa11.95□□□□□ -0.5
PRKCSH-216ENST00000592445 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
PRKCSH-216ENST00000592445 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
PRKCSH-216ENST00000592445 G3V3Q6 166 aa11.94□□□□□ -0.5
PRKCSH-216ENST00000592445 CTRLP40313 264 aa11.94□□□□□ -0.5
PRKCSH-216ENST00000592445 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-216ENST00000592445 MANBALQ9NQG1 85 aa11.94□□□□□ -0.5
PRKCSH-216ENST00000592445 IGLV4-69A0A075B6H9 119 aa11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 SDHAF1A6NFY7 115 aa11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 PMCHP20382 165 aa11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 PRR4Q16378 134 aa11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 EIF5AL1Q6IS14 154 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
PRKCSH-216ENST00000592445 I3L3M4 83 aa11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 APOMO95445 188 aa11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 MALP21145 153 aa11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 CCL20P78556 96 aa11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms