RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 IGLV4-3A0A075B6K6 122 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 KRTAP10-3P60369 221 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 RAB37Q96AX2 223 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 WFDC10AQ9H1F0 79 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 NFE4Q86UQ8 179 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 PYGO1Q9Y3Y4 419 aa14.22□□□□□ -0.13
MBD3-209ENST00000592012 SMIM13P0DJ93 91 aa14.21□□□□□ -0.13
MBD3-209ENST00000592012 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.13
MBD3-209ENST00000592012 FAM104AQ969W3 186 aa14.21□□□□□ -0.13
MBD3-209ENST00000592012 DNAJC30Q96LL9 226 aa14.21□□□□□ -0.13
MBD3-209ENST00000592012 FLNBO75369 2602 aaKnown RBP14.21□□□□□ -0.13
MBD3-209ENST00000592012 FN1P02751 2386 aaKnown RBP14.21□□□□□ -0.14
MBD3-209ENST00000592012 H3BUT2 72 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 HERVK_113P61574 105 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 TMEM170BQ5T4T1 132 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 ZNF815PA8K554 130 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 HIST1H4GQ99525 98 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 VCX2Q9H322 139 aa14.2□□□□□ -0.14
MBD3-209ENST00000592012 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
MBD3-209ENST00000592012 TRGV1A0A0A0MS02 117 aa14.19□□□□□ -0.14
MBD3-209ENST00000592012 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
MBD3-209ENST00000592012 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
MBD3-209ENST00000592012 CHCHD7Q9BUK0 85 aa14.18□□□□□ -0.14
MBD3-209ENST00000592012 NDUFA11Q86Y39 141 aa14.18□□□□□ -0.14
MBD3-209ENST00000592012 PHLDA1Q8WV24 401 aaPredicted RBP14.18□□□□□ -0.14
MBD3-209ENST00000592012 C2CD3Q4AC94 2353 aa14.18□□□□□ -0.14
MBD3-209ENST00000592012 NHP2Q9NX24 153 aaKnown RBP14.17□□□□□ -0.14
MBD3-209ENST00000592012 K7ERJ3 54 aa14.17□□□□□ -0.14
MBD3-209ENST00000592012 Q6ZTI0 123 aa14.17□□□□□ -0.14
MBD3-209ENST00000592012 PLEKHB2Q96CS7 222 aa14.17□□□□□ -0.14
MBD3-209ENST00000592012 AMELXQ99217 191 aa14.17□□□□□ -0.14
MBD3-209ENST00000592012 NSD1Q96L73 2696 aaPredicted RBP14.17□□□□□ -0.14
MBD3-209ENST00000592012 RPL35AP18077 110 aaKnown RBP14.16□□□□□ -0.14
MBD3-209ENST00000592012 CEMP1Q6PRD7 247 aaPredicted RBP14.16□□□□□ -0.14
MBD3-209ENST00000592012 ZNF479Q96JC4 524 aa14.16□□□□□ -0.14
MBD3-209ENST00000592012 IGHV3-38A0A0C4DH36 116 aa14.16□□□□□ -0.14
MBD3-209ENST00000592012 TSPEAR-AS2P59090 65 aa14.16□□□□□ -0.14
MBD3-209ENST00000592012 CRYBA4P53673 196 aa14.15□□□□□ -0.14
MBD3-209ENST00000592012 SCGB1D4Q6XE38 83 aa14.15□□□□□ -0.14
MBD3-209ENST00000592012 A0A0J9YXV3 536 aa14.15□□□□□ -0.14
MBD3-209ENST00000592012 GAGE10A6NGK3 116 aa14.15□□□□□ -0.14
MBD3-209ENST00000592012 CSNK1G2-AS1Q8NCQ2 148 aa14.15□□□□□ -0.14
MBD3-209ENST00000592012 BAHCC1Q9P281 2608 aa14.14□□□□□ -0.15
MBD3-209ENST00000592012 A0A1W2PPM0 123 aa14.14□□□□□ -0.15
MBD3-209ENST00000592012 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
MBD3-209ENST00000592012 UBE2D4Q9Y2X8 147 aa14.14□□□□□ -0.15
MBD3-209ENST00000592012 ZNF22P17026 224 aaPredicted RBP14.14□□□□□ -0.15
MBD3-209ENST00000592012 DAZ2Q13117 558 aaKnown RBP14.14□□□□□ -0.15
MBD3-209ENST00000592012 COTL1Q14019 142 aa14.14□□□□□ -0.15
MBD3-209ENST00000592012 NOP10Q9NPE3 64 aaKnown RBP14.14□□□□□ -0.15
MBD3-209ENST00000592012 PLAC8L1A1L4L8 177 aa14.13□□□□□ -0.15
MBD3-209ENST00000592012 INAFM1C9JVW0 142 aa14.13□□□□□ -0.15
MBD3-209ENST00000592012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.12□□□□□ -0.15
MBD3-209ENST00000592012 IGKV2-29A2NJV5 120 aaPredicted RBP14.12□□□□□ -0.15
MBD3-209ENST00000592012 J3QQQ9 107 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 SAMD5Q5TGI4 173 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 LINC00482Q8N8I6 264 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 SPANXA1Q9NS26 97 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 TRAV4A0A0B4J268 109 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 C12orf74Q32Q52 190 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 C1QTNF4Q9BXJ3 329 aa14.12□□□□□ -0.15
MBD3-209ENST00000592012 A0A0J9YY99 117 aa14.11□□□□□ -0.15
MBD3-209ENST00000592012 PF4P02776 101 aa14.11□□□□□ -0.15
MBD3-209ENST00000592012 GTF2H5Q6ZYL4 71 aa14.11□□□□□ -0.15
MBD3-209ENST00000592012 MRPS36P82909 103 aaKnown RBP14.11□□□□□ -0.15
MBD3-209ENST00000592012 C16orf74Q96GX8 76 aa14.11□□□□□ -0.15
MBD3-209ENST00000592012 VWFP04275 2813 aa14.11□□□□□ -0.15
MBD3-209ENST00000592012 K7EP34 96 aa14.1□□□□□ -0.15
MBD3-209ENST00000592012 RNASE13Q5GAN3 156 aaKnown RBP14.1□□□□□ -0.15
MBD3-209ENST00000592012 HIVEP1P15822 2718 aa14.1□□□□□ -0.15
MBD3-209ENST00000592012 TRBV10-1A0A0K0K1A3 114 aa14.09□□□□□ -0.15
MBD3-209ENST00000592012 A0A1B0GWB2 263 aa14.09□□□□□ -0.15
MBD3-209ENST00000592012 LEPROTO15243 131 aa14.09□□□□□ -0.15
MBD3-209ENST00000592012 GAGE12BA1L429 117 aa14.09□□□□□ -0.15
MBD3-209ENST00000592012 K7EQD1 137 aa14.09□□□□□ -0.15
MBD3-209ENST00000592012 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
MBD3-209ENST00000592012 SRSF9Q13242 221 aaKnown RBP eCLIP14.09□□□□□ -0.15
MBD3-209ENST00000592012 FABP2P12104 132 aa14.08□□□□□ -0.16
MBD3-209ENST00000592012 SLC25A29Q8N8R3 303 aa14.08□□□□□ -0.16
MBD3-209ENST00000592012 OR5A1Q8NGJ0 315 aa14.08□□□□□ -0.16
MBD3-209ENST00000592012 IGLL5B9A064 214 aa14.07□□□□□ -0.16
MBD3-209ENST00000592012 RRN3P1Q2M238 152 aa14.07□□□□□ -0.16
MBD3-209ENST00000592012 OVOL2Q9BRP0 275 aa14.07□□□□□ -0.16
MBD3-209ENST00000592012 SPCS1Q9Y6A9 102 aa14.07□□□□□ -0.16
MBD3-209ENST00000592012 RPL36AP83881 106 aaKnown RBP14.07□□□□□ -0.16
MBD3-209ENST00000592012 Q6ZUT4 128 aa14.07□□□□□ -0.16
MBD3-209ENST00000592012 RPL36ALQ969Q0 106 aaKnown RBP14.07□□□□□ -0.16
MBD3-209ENST00000592012 IGHV3-64A0A075B6Q5 118 aa14.06□□□□□ -0.16
MBD3-209ENST00000592012 SPANXB1Q9NS25 103 aaPredicted RBP14.05□□□□□ -0.16
MBD3-209ENST00000592012 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 GAGE7O76087 117 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 GAGE12FP0CL80 117 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 GAGE12GP0CL81 117 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 GAGE12IP0CL82 117 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 DAZ4Q86SG3 579 aaKnown RBP14.04□□□□□ -0.16
MBD3-209ENST00000592012 DAZ3Q9NR90 486 aaKnown RBP14.04□□□□□ -0.16
MBD3-209ENST00000592012 TENM1Q9UKZ4 2725 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 TRGV2A0A075B6R0 118 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 UBE2D3P61077 147 aa14.04□□□□□ -0.16
MBD3-209ENST00000592012 UBE2D2P62837 147 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms