RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 RHOHQ15669 191 aa10.56□□□□□ -0.72
PRKCSH-212ENST00000591462 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
PRKCSH-212ENST00000591462 C20orf203Q8NBC4 194 aa10.56□□□□□ -0.72
PRKCSH-212ENST00000591462 SMR3AQ99954 134 aa10.56□□□□□ -0.72
PRKCSH-212ENST00000591462 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 F8P00451 2351 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 IGLV4-3A0A075B6K6 122 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 A0A0J9YX75 114 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 H7C2G1 150 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 SLC25A20O43772 301 aa10.55□□□□□ -0.72
PRKCSH-212ENST00000591462 C9JAW5 83 aa10.54□□□□□ -0.72
PRKCSH-212ENST00000591462 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
PRKCSH-212ENST00000591462 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
PRKCSH-212ENST00000591462 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
PRKCSH-212ENST00000591462 TEP1Q99973 2627 aaKnown RBP10.54□□□□□ -0.72
PRKCSH-212ENST00000591462 TLN2Q9Y4G6 2542 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 A0A096LNT2 108 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 CR1P17927 2039 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 M0R2P5 195 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 PIMREGQ9BSJ6 248 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
PRKCSH-212ENST00000591462 CUBNO60494 3623 aa10.52□□□□□ -0.72
PRKCSH-212ENST00000591462 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
PRKCSH-212ENST00000591462 I3L3M4 83 aa10.52□□□□□ -0.73
PRKCSH-212ENST00000591462 LITAFQ99732 161 aa10.52□□□□□ -0.73
PRKCSH-212ENST00000591462 VCX2Q9H322 139 aa10.52□□□□□ -0.73
PRKCSH-212ENST00000591462 K7EQG2 157 aa10.51□□□□□ -0.73
PRKCSH-212ENST00000591462 AVPP01185 164 aa10.51□□□□□ -0.73
PRKCSH-212ENST00000591462 PSMB8P28062 276 aa10.51□□□□□ -0.73
PRKCSH-212ENST00000591462 M0QXV9 152 aa10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 RBMY1A1P0DJD3 496 aaKnown RBP10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 RBMY1CP0DJD4 496 aa10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 IGHV3-30-3P0DP02 117 aa10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 PROK1P58294 105 aa10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 SPXQ9BT56 116 aa10.5□□□□□ -0.73
PRKCSH-212ENST00000591462 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 ANK3Q12955 4377 aaKnown RBP10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 IGHV3-73A0A0B4J1V6 119 aa10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 DSCR9P59020 149 aa10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 RNF183Q96D59 192 aa10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 Q9UF83 564 aa10.49□□□□□ -0.73
PRKCSH-212ENST00000591462 GATA3P23771 443 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 NTN5Q8WTR8 489 aaPredicted RBP10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 CITED1Q99966 193 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 MTORP42345 2549 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 TRIAP1O43715 76 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 Q1RN00 199 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
PRKCSH-212ENST00000591462 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
PRKCSH-212ENST00000591462 CD28P10747 220 aa10.47□□□□□ -0.73
PRKCSH-212ENST00000591462 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
PRKCSH-212ENST00000591462 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
PRKCSH-212ENST00000591462 SONP18583 2426 aaKnown RBP10.46□□□□□ -0.73
PRKCSH-212ENST00000591462 A8MZ25 164 aa10.46□□□□□ -0.73
PRKCSH-212ENST00000591462 DUX5Q96PT3 197 aa10.46□□□□□ -0.73
PRKCSH-212ENST00000591462 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.73
PRKCSH-212ENST00000591462 PRM2P04554 102 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 MSMBP08118 114 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 SYNJ2BPP57105 145 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 ATXN8Q156A1 80 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 PYGO1Q9Y3Y4 419 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 SORL1Q92673 2214 aa10.46□□□□□ -0.74
PRKCSH-212ENST00000591462 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 TEX49A0A1B0GTD5 131 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 IGHV4-31P0DP07 118 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 Q6ZSV7 163 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 CRLF1O75462 422 aa10.45□□□□□ -0.74
PRKCSH-212ENST00000591462 LY6G6DO95868 133 aa10.44□□□□□ -0.74
PRKCSH-212ENST00000591462 HTN1P15515 57 aa10.44□□□□□ -0.74
PRKCSH-212ENST00000591462 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
PRKCSH-212ENST00000591462 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
PRKCSH-212ENST00000591462 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 PRSS2P07478 247 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 Q6ZSN1 163 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 RNF152Q8N8N0 203 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 NPC2P61916 151 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
PRKCSH-212ENST00000591462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■■■□ 20.1
PRKCSH-212ENST00000591462 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 NHLRC4P0CG21 123 aaPredicted RBP10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 TEX29Q8N6K0 151 aa10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 ANAPC13Q9BS18 74 aa10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
PRKCSH-212ENST00000591462 VSIG2Q96IQ7 327 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms