RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
VPS25-205ENST00000590339 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
VPS25-205ENST00000590339 TM2D3Q9BRN9 247 aa6.69□□□□□ -1.34
VPS25-205ENST00000590339 RETNQ9HD89 108 aa6.69□□□□□ -1.34
VPS25-205ENST00000590339 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
VPS25-205ENST00000590339 TRBV10-1A0A0K0K1A3 114 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 F8VRH5 84 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 C3orf84H3BNL1 204 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 K7EQD1 137 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 EREGO14944 169 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 DPM2O94777 84 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 IGKCP01834 107 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 PRSS1P07477 247 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 APOC4P55056 127 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
VPS25-205ENST00000590339 CTAG1AP78358 180 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 ZFAND6Q6FIF0 208 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 Q6ZN92 141 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
VPS25-205ENST00000590339 Q9UF83 564 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
VPS25-205ENST00000590339 COX8AP10176 69 aa6.67□□□□□ -1.34
VPS25-205ENST00000590339 FGF6P10767 208 aa6.67□□□□□ -1.34
VPS25-205ENST00000590339 PLNP26678 52 aa6.67□□□□□ -1.34
VPS25-205ENST00000590339 HNRNPA3P51991 378 aaKnown RBP6.67□□□□□ -1.34
VPS25-205ENST00000590339 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
VPS25-205ENST00000590339 HUWE1Q7Z6Z7 4374 aaKnown RBP6.66□□□□□ -1.34
VPS25-205ENST00000590339 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 GAGE12BA1L429 117 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 GAGE7O76087 117 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 NPSP0C0P6 89 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 GAGE12FP0CL80 117 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 GAGE12GP0CL81 117 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 GAGE12IP0CL82 117 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 CASC10Q5T4H9 136 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 CHCHD7Q9BUK0 85 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 SNHG12Q9BXW3 62 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 MRPS16Q9Y3D3 137 aaKnown RBP6.66□□□□□ -1.34
VPS25-205ENST00000590339 CHTOPQ9Y3Y2 248 aaKnown RBP6.66□□□□□ -1.34
VPS25-205ENST00000590339 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
VPS25-205ENST00000590339 IGLV4-69A0A075B6H9 119 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 UBE2D3P61077 147 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 UBE2D2P62837 147 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 PMVKQ15126 192 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 STPG4Q8N801 248 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
VPS25-205ENST00000590339 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 TRBV7-3A0A075B6L6 115 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 M0R143 59 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 DLEU1O43261 78 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 CRYBA4P53673 196 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 RPL36AP83881 106 aaKnown RBP6.64□□□□□ -1.35
VPS25-205ENST00000590339 COTL1Q14019 142 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 FHL2Q14192 279 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 DEFB135Q30KP9 77 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
VPS25-205ENST00000590339 C2orf91Q6ZV80 131 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 DEFB104AQ8WTQ1 72 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 RPL36ALQ969Q0 106 aaKnown RBP6.64□□□□□ -1.35
VPS25-205ENST00000590339 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 CST9LQ9H4G1 147 aa6.64□□□□□ -1.35
VPS25-205ENST00000590339 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 ZC2HC1BQ5TFG8 222 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 Q8NAQ8 132 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 ZNRF2Q8NHG8 242 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 RNF183Q96D59 192 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 AMELXQ99217 191 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 TIMM21Q9BVV7 248 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
VPS25-205ENST00000590339 KMT2CQ8NEZ4 4911 aaKnown RBP6.62□□□□□ -1.35
VPS25-205ENST00000590339 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 MIFP14174 115 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
VPS25-205ENST00000590339 NFE4Q86UQ8 179 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 PHLDA1Q8WV24 401 aaPredicted RBP6.62□□□□□ -1.35
VPS25-205ENST00000590339 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
VPS25-205ENST00000590339 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
VPS25-205ENST00000590339 GAGE12JA6NER3 117 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 MRPS36P82909 103 aaKnown RBP6.61□□□□□ -1.35
VPS25-205ENST00000590339 GAGE1Q13065 139 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 GAGE4Q13068 117 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 GAGE5Q13069 117 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 GAGE13Q4V321 117 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 NTM-AS1Q6ZSK4 140 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms