RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 DAZ3Q9NR90 486 aaKnown RBP5.22□□□□□ -1.57
SMAD4-210ENST00000590061 MRPL16Q9NX20 251 aaKnown RBP5.22□□□□□ -1.57
SMAD4-210ENST00000590061 MSRB1Q9NZV6 116 aa5.22□□□□□ -1.57
SMAD4-210ENST00000590061 HHLA3Q9XRX5 114 aa5.22□□□□□ -1.57
SMAD4-210ENST00000590061 CSDC2Q9Y534 153 aaKnown RBP5.22□□□□□ -1.57
SMAD4-210ENST00000590061 KIF25-AS1Q9Y6Z4 181 aa5.22□□□□□ -1.57
SMAD4-210ENST00000590061 CMYA5Q8N3K9 4069 aa5.21□□□□□ -1.57
SMAD4-210ENST00000590061 MUC21A0A0G2JKD1 596 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 MUC21A0A140T8X8 626 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 D6R8Y8 96 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 NCR2O95944 276 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 SUMO2P61956 95 aaKnown RBP5.21□□□□□ -1.58
SMAD4-210ENST00000590061 DEFA6Q01524 100 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 ORMDL2Q53FV1 153 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 FA2HQ7L5A8 372 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 TMEM18Q96B42 140 aa5.21□□□□□ -1.58
SMAD4-210ENST00000590061 TRBV7-3A0A075B6L6 115 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 K7EQD1 137 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 M0QY20 66 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 GATA1P15976 413 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-210ENST00000590061 SRIP30626 198 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 TCTAP57738 103 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 MRPL23Q16540 153 aaKnown RBP5.2□□□□□ -1.58
SMAD4-210ENST00000590061 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
SMAD4-210ENST00000590061 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 UFSP1Q6NVU6 142 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 RNF185Q96GF1 192 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 DNAH3Q8TD57 4116 aa5.2□□□□□ -1.58
SMAD4-210ENST00000590061 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 TRAV10A0A0B4J240 114 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 TRBV27A0A0K0K1C4 114 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 TSTD3H0UI37 97 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 I3L3M4 83 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BKO60814 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BJP06899 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 GYPEP15421 78 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BOP23527 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 FCER1GP30273 86 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BBP33778 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BDP58876 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 LINC00315P59091 139 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BCP62807 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST2H2BEQ16778 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-210ENST00000590061 Q8N8P6 123 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BHQ93079 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 C12orf57Q99622 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BNQ99877 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 HIST1H2BMQ99879 126 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
SMAD4-210ENST00000590061 A0A0J9YWU9 116 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 F5H768 121 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 H7C423 109 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 PRB2P02812 416 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-210ENST00000590061 NPSP0C0P6 89 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 S100A2P29034 98 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 HERV-K104P63124 156 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 GAGE1Q13065 139 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 SLC25A29Q8N8R3 303 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 SMIM2Q9BVW6 85 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 GTSF1LQ9H1H1 148 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 KLK5Q9Y337 293 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-210ENST00000590061 ICOSQ9Y6W8 199 aa5.18□□□□□ -1.58
SMAD4-210ENST00000590061 DEFB131BA0A096LNP1 70 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 SDHAF1A6NFY7 115 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 LINC01546A6NGU7 62 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 PRM2P04554 102 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 ESDP10768 282 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 CRYBA4P53673 196 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 LAGE3Q14657 143 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 C12orf74Q32Q52 190 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 KIAA1644Q3SXP7 199 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 NRACQ8N912 160 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 TMEM70Q9BUB7 260 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 NACAE9PAV3 2078 aa5.17□□□□□ -1.58
SMAD4-210ENST00000590061 NUPR2A6NF83 97 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 ATP5LO75964 103 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 NPYP01303 97 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 SMIM6P0DI80 62 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 POLR2KP53803 58 aaKnown RBP5.16□□□□□ -1.58
SMAD4-210ENST00000590061 NDUFA6P56556 154 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 NEGR1Q7Z3B1 354 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 NIT1Q86X76 327 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 JPT2Q9H910 190 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 V9GYY9 64 aa5.16□□□□□ -1.58
SMAD4-210ENST00000590061 TRBV25-1A0A075B6N4 114 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 IGHV3-73A0A0B4J1V6 119 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 TRAV26-2A0A0B4J265 109 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 LINC00587B1AMM8 73 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 DEFB4AO15263 64 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 SIVA1O15304 175 aa5.15□□□□□ -1.59
SMAD4-210ENST00000590061 NUDT3O95989 172 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms