RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
IFT20-216ENST00000588477 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
IFT20-216ENST00000588477 TPPP3Q9BW30 176 aa9.41□□□□□ -0.9
IFT20-216ENST00000588477 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
IFT20-216ENST00000588477 COTL1Q14019 142 aa9.4□□□□□ -0.9
IFT20-216ENST00000588477 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
IFT20-216ENST00000588477 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
IFT20-216ENST00000588477 FXYD6-FXYD2A0A087WZ82 144 aa9.38□□□□□ -0.91
IFT20-216ENST00000588477 IGLC6P0CF74 106 aa9.38□□□□□ -0.91
IFT20-216ENST00000588477 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
IFT20-216ENST00000588477 MED28Q9H204 178 aa9.38□□□□□ -0.91
IFT20-216ENST00000588477 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
IFT20-216ENST00000588477 FOXI1Q12951 378 aa9.37□□□□□ -0.91
IFT20-216ENST00000588477 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
IFT20-216ENST00000588477 TMUB2Q71RG4 321 aa9.37□□□□□ -0.91
IFT20-216ENST00000588477 CARD19Q96LW7 228 aa9.37□□□□□ -0.91
IFT20-216ENST00000588477 A0A1B0GV50 99 aa9.36□□□□□ -0.91
IFT20-216ENST00000588477 PFDN1O60925 122 aa9.36□□□□□ -0.91
IFT20-216ENST00000588477 CACNG7P62955 275 aa9.36□□□□□ -0.91
IFT20-216ENST00000588477 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
IFT20-216ENST00000588477 MUC2Q02817 5179 aa9.35□□□□□ -0.91
IFT20-216ENST00000588477 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
IFT20-216ENST00000588477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.34□□□□□ -0.91
IFT20-216ENST00000588477 IGKV2-29A2NJV5 120 aaPredicted RBP9.34□□□□□ -0.91
IFT20-216ENST00000588477 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 XCL1P47992 114 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 SFT2D1Q8WV19 159 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
IFT20-216ENST00000588477 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 GIPP09681 153 aaPredicted RBP9.33□□□□□ -0.92
IFT20-216ENST00000588477 NTF3P20783 257 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
IFT20-216ENST00000588477 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
IFT20-216ENST00000588477 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 LYZL1Q6UWQ5 148 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 Q6ZNX1 250 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 CYTL1Q9NRR1 136 aa9.33□□□□□ -0.92
IFT20-216ENST00000588477 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 F2Z2F3 143 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 CCL25O15444 150 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 MT-ND6P03923 174 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 FGF6P10767 208 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
IFT20-216ENST00000588477 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 KCNRGQ8N5I3 272 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 FAM213BQ8TBF2 198 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 MBD3L1Q8WWY6 194 aa9.31□□□□□ -0.92
IFT20-216ENST00000588477 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
IFT20-216ENST00000588477 LINC00959A0A1B0GUT2 108 aa9.3□□□□□ -0.92
IFT20-216ENST00000588477 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
IFT20-216ENST00000588477 H7C423 109 aa9.3□□□□□ -0.92
IFT20-216ENST00000588477 APCSP02743 223 aa9.3□□□□□ -0.92
IFT20-216ENST00000588477 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
IFT20-216ENST00000588477 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
IFT20-216ENST00000588477 NCR2O95944 276 aa9.29□□□□□ -0.92
IFT20-216ENST00000588477 ARPC5O15511 151 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 IFNA1P01562 189 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 BCL2P10415 239 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
IFT20-216ENST00000588477 CAMPP49913 170 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
IFT20-216ENST00000588477 BTF3L4Q96K17 158 aa9.28□□□□□ -0.92
IFT20-216ENST00000588477 SS18Q15532 418 aa9.27□□□□□ -0.93
IFT20-216ENST00000588477 TWIST1Q15672 202 aa9.27□□□□□ -0.93
IFT20-216ENST00000588477 PRR4Q16378 134 aa9.27□□□□□ -0.93
IFT20-216ENST00000588477 C9orf116Q5BN46 136 aaPredicted RBP9.27□□□□□ -0.93
IFT20-216ENST00000588477 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
IFT20-216ENST00000588477 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
IFT20-216ENST00000588477 TMEM101Q96IK0 257 aa9.27□□□□□ -0.93
IFT20-216ENST00000588477 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
IFT20-216ENST00000588477 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
IFT20-216ENST00000588477 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
IFT20-216ENST00000588477 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 SDHAF1A6NFY7 115 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 G3V3Q6 166 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 CD164L2Q6UWJ8 174 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 C11orf52Q96A22 123 aa9.25□□□□□ -0.93
IFT20-216ENST00000588477 KRTAP9-6A0A140TA67 174 aa9.24□□□□□ -0.93
IFT20-216ENST00000588477 UMAD1C9J7I0 102 aa9.24□□□□□ -0.93
IFT20-216ENST00000588477 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
IFT20-216ENST00000588477 PMCHP20382 165 aa9.24□□□□□ -0.93
IFT20-216ENST00000588477 CTRLP40313 264 aa9.24□□□□□ -0.93
IFT20-216ENST00000588477 GNG4P50150 75 aa9.23□□□□□ -0.93
IFT20-216ENST00000588477 EIF5AP63241 154 aaKnown RBP9.23□□□□□ -0.93
IFT20-216ENST00000588477 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
IFT20-216ENST00000588477 EIF5AL1Q6IS14 154 aaKnown RBP9.23□□□□□ -0.93
IFT20-216ENST00000588477 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
IFT20-216ENST00000588477 H0Y9J4 135 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.22□□□□□ -0.93
IFT20-216ENST00000588477 I3L3M4 83 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms