RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 USP34Q70CQ2 3546 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 IGHV4-4A0A075B6R2 117 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 C12orf77C9JDV5 145 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 H0YGG7 62 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 PPP1R17O96001 155 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 LHBP01229 141 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 CCL4P13236 92 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 SYCNQ0VAF6 134 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 Q8N6K4 173 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 CHCHD10Q8WYQ3 142 aaPredicted RBP4.01□□□□□ -1.77
LINC01538-201ENST00000588074 SPAG17Q6Q759 2223 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 IGKV1D-37A0A075B6S9 117 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 TRAV12-3A0A0B4J271 114 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 C5orf67F2Z3F1 127 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 Q6ZTC4 211 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 LINC00269Q8N2A0 174 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 FGF23Q9GZV9 251 aaPredicted RBP4□□□□□ -1.77
LINC01538-201ENST00000588074 TET2Q6N021 2002 aaPredicted RBP4□□□□□ -1.77
LINC01538-201ENST00000588074 LINC00205P59089 165 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 ENHOQ6UWT2 76 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 FLVCR1-AS1Q8TAF5 88 aa4□□□□□ -1.77
LINC01538-201ENST00000588074 IGLV3-19P01714 112 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 ERHP84090 104 aaKnown RBP3.99□□□□□ -1.77
LINC01538-201ENST00000588074 C17orf58Q2M2W7 97 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 PRRC2BQ5JSZ5 2229 aaKnown RBP3.99□□□□□ -1.77
LINC01538-201ENST00000588074 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
LINC01538-201ENST00000588074 Q6ZS52 159 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 ZNF833PQ6ZTB9 187 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 UBL5Q9BZL1 73 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 C14orf132Q9NPU4 83 aa3.99□□□□□ -1.77
LINC01538-201ENST00000588074 TRANK1O15050 2925 aa3.98□□□□□ -1.77
LINC01538-201ENST00000588074 BUB1B-PAK6H3BSN5 160 aa3.98□□□□□ -1.77
LINC01538-201ENST00000588074 IGHV1-69P01742 117 aa3.98□□□□□ -1.77
LINC01538-201ENST00000588074 PDE6HQ13956 83 aa3.98□□□□□ -1.77
LINC01538-201ENST00000588074 CLEC19AQ6UXS0 136 aa3.98□□□□□ -1.77
LINC01538-201ENST00000588074 GPHB5Q86YW7 130 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 IGKV3-11P04433 115 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 MP68P56378 58 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 KIAA0087Q14695 138 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 C15orf32Q32M92 178 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 LINC01560Q8TB33 94 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 CYP4F30PQ9H0H9 118 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 CCL26Q9Y258 94 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 SMAD5-AS1Q9Y6J3 95 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 ESPL1Q14674 2120 aa3.97□□□□□ -1.77
LINC01538-201ENST00000588074 A0A087WW49 117 aa3.96□□□□□ -1.77
LINC01538-201ENST00000588074 RPL37AP8A6NKH3 93 aa3.96□□□□□ -1.77
LINC01538-201ENST00000588074 LINC00313P59037 77 aa3.96□□□□□ -1.77
LINC01538-201ENST00000588074 MYO15AQ9UKN7 3530 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 C16orf90A8MZG2 172 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 ZNF32P17041 273 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV1-2P23083 117 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 NACAE9PAV3 2078 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 DSCAMO60469 2012 aa3.96□□□□□ -1.78
LINC01538-201ENST00000588074 KLLNB2CW77 178 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 PSPHP1O15172 72 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 S100A4P26447 101 aaKnown RBP3.95□□□□□ -1.78
LINC01538-201ENST00000588074 LPAL2Q16609 132 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 NDUFA4L2Q9NRX3 87 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 MRPL36Q9P0J6 103 aaKnown RBP3.95□□□□□ -1.78
LINC01538-201ENST00000588074 MED12Q93074 2177 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 UNC13CQ8NB66 2214 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 GNRH2O43555 120 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 TRGV3P03979 118 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 PLA2G2AP14555 144 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 REG3AQ06141 175 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
LINC01538-201ENST00000588074 INTS1Q8N201 2190 aaKnown RBP3.95□□□□□ -1.78
LINC01538-201ENST00000588074 H0Y9J4 135 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV3-30-3P0DP02 117 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 NREPQ16612 68 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 SPANXN1Q5VSR9 72 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 Q5VV11 94 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 WFDC9Q8NEX5 89 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 NDUFA12Q9UI09 145 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 TRAV10A0A0B4J240 114 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 HCG22E2RYF7 251 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 H0YGX0 51 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 CTSGP08311 255 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 PATE4P0C8F1 98 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 DSCR9P59020 149 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 ITLN2Q8WWU7 325 aaPredicted RBP3.94□□□□□ -1.78
LINC01538-201ENST00000588074 KIF25-AS1Q9Y6Z4 181 aa3.94□□□□□ -1.78
LINC01538-201ENST00000588074 TRIOO75962 3097 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 USF3Q68DE3 2245 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 LIMD2Q9BT23 127 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 KNTC1P50748 2209 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 H3BRN7 92 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 RPL39P5Q59GN2 51 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 ZNF625Q96I27 306 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms