RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
ERCC2-208ENST00000586737 TWIST1Q15672 202 aa8.36□□□□□ -1.07
ERCC2-208ENST00000586737 C14orf177Q52M58 125 aa8.36□□□□□ -1.07
ERCC2-208ENST00000586737 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
ERCC2-208ENST00000586737 TMEM243Q9BU79 118 aa8.36□□□□□ -1.07
ERCC2-208ENST00000586737 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
ERCC2-208ENST00000586737 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
ERCC2-208ENST00000586737 REG3AQ06141 175 aa8.35□□□□□ -1.07
ERCC2-208ENST00000586737 FAM231DQ6ZW35 169 aa8.35□□□□□ -1.07
ERCC2-208ENST00000586737 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
ERCC2-208ENST00000586737 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
ERCC2-208ENST00000586737 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
ERCC2-208ENST00000586737 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
ERCC2-208ENST00000586737 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
ERCC2-208ENST00000586737 COTL1Q14019 142 aa8.32□□□□□ -1.08
ERCC2-208ENST00000586737 DGAT2L7PQ6IED9 249 aa8.32□□□□□ -1.08
ERCC2-208ENST00000586737 C9orf163Q8N9P6 203 aa8.32□□□□□ -1.08
ERCC2-208ENST00000586737 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
ERCC2-208ENST00000586737 TRAV8-4A0A0B4J246 113 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 A0A1B0GVG6 124 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 PANO1I0J062 215 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 NDUFS6O75380 124 aaKnown RBP8.31□□□□□ -1.08
ERCC2-208ENST00000586737 GAS8-AS1O95177 125 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 SLPIP03973 132 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 AMTP48728 403 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 CT83Q5H943 113 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
ERCC2-208ENST00000586737 A8MWL6 223 aa8.3□□□□□ -1.08
ERCC2-208ENST00000586737 SRP19P09132 144 aaKnown RBP8.3□□□□□ -1.08
ERCC2-208ENST00000586737 LINC01551Q86U37 167 aa8.3□□□□□ -1.08
ERCC2-208ENST00000586737 FAM210AQ96ND0 272 aa8.3□□□□□ -1.08
ERCC2-208ENST00000586737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
ERCC2-208ENST00000586737 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
ERCC2-208ENST00000586737 CEBPGP53567 150 aa8.29□□□□□ -1.08
ERCC2-208ENST00000586737 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
ERCC2-208ENST00000586737 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
ERCC2-208ENST00000586737 PKHD1L1Q86WI1 4243 aa8.29□□□□□ -1.08
ERCC2-208ENST00000586737 TRBV6-5A0A0K0K1A5 114 aa8.28□□□□□ -1.08
ERCC2-208ENST00000586737 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
ERCC2-208ENST00000586737 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
ERCC2-208ENST00000586737 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
ERCC2-208ENST00000586737 SMIM7Q9BQ49 75 aa8.28□□□□□ -1.08
ERCC2-208ENST00000586737 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
ERCC2-208ENST00000586737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
ERCC2-208ENST00000586737 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
ERCC2-208ENST00000586737 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 UBE2L6O14933 153 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 NCR2O95944 276 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 TSKUQ8WUA8 353 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 OSTCQ9NRP0 149 aa8.27□□□□□ -1.09
ERCC2-208ENST00000586737 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 ZNF727A8MUV8 499 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 C9JQL5 133 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 ESDP10768 282 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 RPS10P46783 165 aaKnown RBP8.26□□□□□ -1.09
ERCC2-208ENST00000586737 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
ERCC2-208ENST00000586737 TEX261Q6UWH6 196 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 V9GYV3 84 aa8.26□□□□□ -1.09
ERCC2-208ENST00000586737 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 A0A1B0GUT8 65 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 H7C423 109 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 TSHBP01222 138 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 FGF6P10767 208 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 RAB4AP20338 218 aa8.25□□□□□ -1.09
ERCC2-208ENST00000586737 HNRNPA3P51991 378 aaKnown RBP8.25□□□□□ -1.09
ERCC2-208ENST00000586737 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
ERCC2-208ENST00000586737 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
ERCC2-208ENST00000586737 I3L3M4 83 aa8.24□□□□□ -1.09
ERCC2-208ENST00000586737 J3QL48 77 aa8.24□□□□□ -1.09
ERCC2-208ENST00000586737 APCSP02743 223 aa8.24□□□□□ -1.09
ERCC2-208ENST00000586737 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
ERCC2-208ENST00000586737 ISOC2Q96AB3 205 aa8.24□□□□□ -1.09
ERCC2-208ENST00000586737 PMCHP20382 165 aa8.23□□□□□ -1.09
ERCC2-208ENST00000586737 RPL23P62829 140 aaKnown RBP8.23□□□□□ -1.09
ERCC2-208ENST00000586737 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
ERCC2-208ENST00000586737 RNASEKQ6P5S7 137 aaKnown RBP8.23□□□□□ -1.09
ERCC2-208ENST00000586737 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
ERCC2-208ENST00000586737 NUP35Q8NFH5 326 aa8.23□□□□□ -1.09
ERCC2-208ENST00000586737 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
ERCC2-208ENST00000586737 TRBV27A0A0K0K1C4 114 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
ERCC2-208ENST00000586737 FOXI1Q12951 378 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 BORCS7Q96B45 105 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
ERCC2-208ENST00000586737 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
ERCC2-208ENST00000586737 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 NRACQ8N912 160 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 AP5S1Q9NUS5 200 aa8.21□□□□□ -1.1
ERCC2-208ENST00000586737 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
ERCC2-208ENST00000586737 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms