RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 VPS13BQ7Z7G8 4022 aa7.33□□□□□ -1.24
ACTN4-209ENST00000586538 H7C423 109 aa7.33□□□□□ -1.24
ACTN4-209ENST00000586538 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
ACTN4-209ENST00000586538 CT83Q5H943 113 aa7.33□□□□□ -1.24
ACTN4-209ENST00000586538 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
ACTN4-209ENST00000586538 FAM231DQ6ZW35 169 aa7.33□□□□□ -1.24
ACTN4-209ENST00000586538 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 AMMECR1LQ6DCA0 310 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 CFAP161Q6P656 301 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 Q6ZNX1 250 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
ACTN4-209ENST00000586538 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
ACTN4-209ENST00000586538 APCSP02743 223 aa7.31□□□□□ -1.24
ACTN4-209ENST00000586538 PRSS1P07477 247 aa7.31□□□□□ -1.24
ACTN4-209ENST00000586538 ALKAL2Q6UX46 152 aa7.31□□□□□ -1.24
ACTN4-209ENST00000586538 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
ACTN4-209ENST00000586538 EIF5A2Q9GZV4 153 aaKnown RBP7.31□□□□□ -1.24
ACTN4-209ENST00000586538 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
ACTN4-209ENST00000586538 HERC1Q15751 4861 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 IGLV10-54A0A075B6I4 117 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 FAM231BA6NCW3 169 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 K7EN84 100 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
ACTN4-209ENST00000586538 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
ACTN4-209ENST00000586538 LYPD6BQ8NI32 183 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 BTF3L4Q96K17 158 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
ACTN4-209ENST00000586538 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
ACTN4-209ENST00000586538 CEBPGP53567 150 aa7.29□□□□□ -1.24
ACTN4-209ENST00000586538 SMAGPQ0VAQ4 97 aa7.29□□□□□ -1.24
ACTN4-209ENST00000586538 GATD1Q8NB37 220 aa7.29□□□□□ -1.24
ACTN4-209ENST00000586538 TMEM101Q96IK0 257 aa7.29□□□□□ -1.24
ACTN4-209ENST00000586538 SMIM7Q9BQ49 75 aa7.29□□□□□ -1.24
ACTN4-209ENST00000586538 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
ACTN4-209ENST00000586538 IGHV3-64A0A075B6Q5 118 aa7.28□□□□□ -1.24
ACTN4-209ENST00000586538 SDHAF1A6NFY7 115 aa7.28□□□□□ -1.24
ACTN4-209ENST00000586538 I3L3M4 83 aa7.28□□□□□ -1.24
ACTN4-209ENST00000586538 FOXA3P55318 350 aaPredicted RBP7.28□□□□□ -1.24
ACTN4-209ENST00000586538 RPL37AP61513 92 aaKnown RBP7.28□□□□□ -1.24
ACTN4-209ENST00000586538 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
ACTN4-209ENST00000586538 GTSF1Q8WW33 167 aa7.28□□□□□ -1.24
ACTN4-209ENST00000586538 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.24
ACTN4-209ENST00000586538 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 A0A1B0GUT8 65 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 PPP1R17O96001 155 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 PMCHP20382 165 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 TSKUQ8WUA8 353 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
ACTN4-209ENST00000586538 hCG_2014768A0A024R1R8 64 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 ZNF727A8MUV8 499 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 OXTP01178 125 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 MRAP2Q96G30 205 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
ACTN4-209ENST00000586538 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
ACTN4-209ENST00000586538 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
ACTN4-209ENST00000586538 FAM74A3Q4VXF1 159 aa7.25□□□□□ -1.25
ACTN4-209ENST00000586538 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
ACTN4-209ENST00000586538 RPL39LQ96EH5 51 aaKnown RBP7.25□□□□□ -1.25
ACTN4-209ENST00000586538 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
ACTN4-209ENST00000586538 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
ACTN4-209ENST00000586538 FGF6P10767 208 aa7.24□□□□□ -1.25
ACTN4-209ENST00000586538 RIGQ13278 110 aa7.24□□□□□ -1.25
ACTN4-209ENST00000586538 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
ACTN4-209ENST00000586538 OR5A1Q8NGJ0 315 aa7.24□□□□□ -1.25
ACTN4-209ENST00000586538 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
ACTN4-209ENST00000586538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
ACTN4-209ENST00000586538 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
ACTN4-209ENST00000586538 PPP1R2P9O14990 202 aa7.23□□□□□ -1.25
ACTN4-209ENST00000586538 RPS10P46783 165 aaKnown RBP7.23□□□□□ -1.25
ACTN4-209ENST00000586538 CIRBPQ14011 172 aaKnown RBP7.23□□□□□ -1.25
ACTN4-209ENST00000586538 SS18Q15532 418 aa7.23□□□□□ -1.25
ACTN4-209ENST00000586538 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
ACTN4-209ENST00000586538 LINC00474Q9P2X8 69 aa7.23□□□□□ -1.25
ACTN4-209ENST00000586538 NAT8BQ9UHF3 227 aa7.23□□□□□ -1.25
ACTN4-209ENST00000586538 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 C7orf77A4D0Y5 90 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 TCAPO15273 167 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 CCL25O15444 150 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 FCER1GP30273 86 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 TMEM241Q24JQ0 296 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 C7orf33Q8WU49 177 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 TMEM18Q96B42 140 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 KIR2DL4Q99706 377 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 SMDT1Q9H4I9 107 aa7.22□□□□□ -1.25
ACTN4-209ENST00000586538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
ACTN4-209ENST00000586538 GVQW2A0A096LPI5 108 aaPredicted RBP7.21□□□□□ -1.26
ACTN4-209ENST00000586538 A0A1B0GW15 77 aa7.21□□□□□ -1.26
ACTN4-209ENST00000586538 VCYO14598 125 aa7.21□□□□□ -1.26
ACTN4-209ENST00000586538 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.26
ACTN4-209ENST00000586538 MRPL52Q86TS9 123 aaKnown RBP7.21□□□□□ -1.26
ACTN4-209ENST00000586538 IGHV1-58A0A0C4DH39 117 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms