RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
PRKCSH-203ENST00000586486 TRAV8-6A0A0B4J262 113 aa11.62□□□□□ -0.55
PRKCSH-203ENST00000586486 K7EMI3 77 aa11.62□□□□□ -0.55
PRKCSH-203ENST00000586486 AMTP48728 403 aa11.62□□□□□ -0.55
PRKCSH-203ENST00000586486 FCER1GP30273 86 aa11.61□□□□□ -0.55
PRKCSH-203ENST00000586486 ESDP10768 282 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 IFI27P40305 119 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 WFDC10BQ8IUB3 73 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
PRKCSH-203ENST00000586486 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
PRKCSH-203ENST00000586486 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
PRKCSH-203ENST00000586486 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
PRKCSH-203ENST00000586486 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
PRKCSH-203ENST00000586486 SIVA1O15304 175 aa11.58□□□□□ -0.56
PRKCSH-203ENST00000586486 PKIAP61925 76 aa11.58□□□□□ -0.56
PRKCSH-203ENST00000586486 CHCHD5Q9BSY4 110 aa11.58□□□□□ -0.56
PRKCSH-203ENST00000586486 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
PRKCSH-203ENST00000586486 H7C423 109 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 Q0VG73 95 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 ORMDL2Q53FV1 153 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 NIT1Q86X76 327 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 Q9H8V8 135 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 LY6G6CO95867 125 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 LAGE3Q14657 143 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 FA2HQ7L5A8 372 aa11.57□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 RAB5BP61020 215 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 C20orf203Q8NBC4 194 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 URB1-AS1Q96HZ7 61 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
PRKCSH-203ENST00000586486 UBE2L6O14933 153 aa11.55□□□□□ -0.56
PRKCSH-203ENST00000586486 LINC00614P0C842 121 aa11.55□□□□□ -0.56
PRKCSH-203ENST00000586486 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
PRKCSH-203ENST00000586486 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
PRKCSH-203ENST00000586486 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-203ENST00000586486 LCE6AA0A183 80 aa11.54□□□□□ -0.56
PRKCSH-203ENST00000586486 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-203ENST00000586486 C1orf196B1AJZ1 125 aa11.54□□□□□ -0.56
PRKCSH-203ENST00000586486 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
PRKCSH-203ENST00000586486 K7EP13 123 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 GAGE6Q13070 117 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 A0A087WX48 190 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 G0S2P27469 103 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-203ENST00000586486 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
PRKCSH-203ENST00000586486 FGF6P10767 208 aa11.52□□□□□ -0.57
PRKCSH-203ENST00000586486 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
PRKCSH-203ENST00000586486 RNASEKQ6P5S7 137 aaKnown RBP11.52□□□□□ -0.57
PRKCSH-203ENST00000586486 RBX1P62877 108 aa11.51□□□□□ -0.57
PRKCSH-203ENST00000586486 SMAGPQ0VAQ4 97 aa11.51□□□□□ -0.57
PRKCSH-203ENST00000586486 Q8N3U1 123 aa11.51□□□□□ -0.57
PRKCSH-203ENST00000586486 TIMM21Q9BVV7 248 aa11.51□□□□□ -0.57
PRKCSH-203ENST00000586486 RPL39P62891 51 aaKnown RBP11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 TTC32Q5I0X7 151 aa11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 C2orf66Q6UXQ4 117 aa11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 CYSLTR1Q9Y271 337 aa11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 UBE2D4Q9Y2X8 147 aa11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
PRKCSH-203ENST00000586486 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 IGHV3-30P01768 117 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 IGHV3-30-5P0DP03 117 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 LINC00310P59036 64 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 Q8N976 141 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 NBDYA0A0U1RRE5 68 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 SERF1AO75920 110 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 TOMM6Q96B49 74 aa11.49□□□□□ -0.57
PRKCSH-203ENST00000586486 A0A096LNJ9 63 aa11.48□□□□□ -0.57
PRKCSH-203ENST00000586486 TMEM101Q96IK0 257 aa11.48□□□□□ -0.57
PRKCSH-203ENST00000586486 PYGO1Q9Y3Y4 419 aa11.48□□□□□ -0.57
PRKCSH-203ENST00000586486 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
PRKCSH-203ENST00000586486 HBDP02042 147 aa11.47□□□□□ -0.57
PRKCSH-203ENST00000586486 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-203ENST00000586486 OR5A1Q8NGJ0 315 aa11.47□□□□□ -0.57
PRKCSH-203ENST00000586486 KRTAP1-5Q9BYS1 174 aa11.47□□□□□ -0.57
PRKCSH-203ENST00000586486 HSBP1O75506 76 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms