RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-225ENST00000586385 H7C1H1 209 aa7.37□□□□□ -1.23
BRCA1-225ENST00000586385 ARPC5O15511 151 aa7.37□□□□□ -1.23
BRCA1-225ENST00000586385 RPL35P42766 123 aaKnown RBP7.37□□□□□ -1.23
BRCA1-225ENST00000586385 SULT1A2P50226 295 aa7.37□□□□□ -1.23
BRCA1-225ENST00000586385 TPPP3Q9BW30 176 aa7.37□□□□□ -1.23
BRCA1-225ENST00000586385 C19orf71A6NCJ1 209 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 AMTP48728 403 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 SPINK6Q6UWN8 80 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 FAM213BQ8TBF2 198 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 C11orf52Q96A22 123 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
BRCA1-225ENST00000586385 IGKV3OR2-268A0A0C4DH90 116 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 SMLR1H3BR10 107 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 CCL20P78556 96 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 FOXI1Q12951 378 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 Q6ZNX1 250 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 OR2D3Q8NGH3 330 aa7.35□□□□□ -1.23
BRCA1-225ENST00000586385 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-225ENST00000586385 PFDN1O60925 122 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 CACNG7P62955 275 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 COTL1Q14019 142 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 LYZL1Q6UWQ5 148 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 KCNRGQ8N5I3 272 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 LINC00526Q96FQ7 95 aa7.34□□□□□ -1.23
BRCA1-225ENST00000586385 LPAP08519 4548 aa7.33□□□□□ -1.24
BRCA1-225ENST00000586385 TRBV20OR9-2A0A075B6H5 130 aa7.33□□□□□ -1.24
BRCA1-225ENST00000586385 UBE2L6O14933 153 aa7.33□□□□□ -1.24
BRCA1-225ENST00000586385 NTF3P20783 257 aa7.33□□□□□ -1.24
BRCA1-225ENST00000586385 GATD1Q8NB37 220 aa7.33□□□□□ -1.24
BRCA1-225ENST00000586385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-225ENST00000586385 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
BRCA1-225ENST00000586385 IGKV2-29A2NJV5 120 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-225ENST00000586385 RAB19A4D1S5 217 aa7.32□□□□□ -1.24
BRCA1-225ENST00000586385 RPS20P60866 119 aaKnown RBP7.32□□□□□ -1.24
BRCA1-225ENST00000586385 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
BRCA1-225ENST00000586385 UMAD1C9J7I0 102 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 F2Z2F3 143 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 H2AFB1P0C5Y9 115 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 CTRLP40313 264 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 C9orf62Q8N4C0 152 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
BRCA1-225ENST00000586385 CNFNQ9BYD5 112 aa7.31□□□□□ -1.24
BRCA1-225ENST00000586385 FAM231BA6NCW3 169 aa7.3□□□□□ -1.24
BRCA1-225ENST00000586385 FGF6P10767 208 aa7.3□□□□□ -1.24
BRCA1-225ENST00000586385 FOXA3P55318 350 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-225ENST00000586385 Q6ZRP5 223 aa7.3□□□□□ -1.24
BRCA1-225ENST00000586385 GNG13Q9P2W3 67 aa7.3□□□□□ -1.24
BRCA1-225ENST00000586385 IFNA1P01562 189 aa7.29□□□□□ -1.24
BRCA1-225ENST00000586385 XCL1P47992 114 aa7.29□□□□□ -1.24
BRCA1-225ENST00000586385 ZNF345Q14585 488 aa7.29□□□□□ -1.24
BRCA1-225ENST00000586385 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
BRCA1-225ENST00000586385 AKAP14Q86UN6 197 aa7.29□□□□□ -1.24
BRCA1-225ENST00000586385 CARD19Q96LW7 228 aa7.29□□□□□ -1.24
BRCA1-225ENST00000586385 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
BRCA1-225ENST00000586385 CCL25O15444 150 aa7.28□□□□□ -1.24
BRCA1-225ENST00000586385 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
BRCA1-225ENST00000586385 OR5A1Q8NGJ0 315 aa7.28□□□□□ -1.24
BRCA1-225ENST00000586385 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
BRCA1-225ENST00000586385 TRAV1-1A0A0B4J248 108 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 IGHV1-58A0A0C4DH39 117 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 H7C423 109 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 BCL2L11O43521 198 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 NCR2O95944 276 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 NUDT10Q8NFP7 164 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 SMIM12Q96EX1 92 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 NUDT11Q96G61 164 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
BRCA1-225ENST00000586385 XKRY2A2RUG3 117 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 SDHAF1A6NFY7 115 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 ESDP10768 282 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 GNG4P50150 75 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 TWIST1Q15672 202 aa7.26□□□□□ -1.25
BRCA1-225ENST00000586385 K7EN84 100 aa7.25□□□□□ -1.25
BRCA1-225ENST00000586385 TSHBP01222 138 aa7.25□□□□□ -1.25
BRCA1-225ENST00000586385 APCSP02743 223 aa7.25□□□□□ -1.25
BRCA1-225ENST00000586385 PSORS1C2Q9UIG4 136 aa7.25□□□□□ -1.25
BRCA1-225ENST00000586385 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
BRCA1-225ENST00000586385 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-225ENST00000586385 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
BRCA1-225ENST00000586385 RNASE7Q9H1E1 156 aaKnown RBP7.24□□□□□ -1.25
BRCA1-225ENST00000586385 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 BCL2P10415 239 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-225ENST00000586385 GAGE2BQ13066 116 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
BRCA1-225ENST00000586385 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 MED9Q9NWA0 146 aa7.23□□□□□ -1.25
BRCA1-225ENST00000586385 hCG_2014768A0A024R1R8 64 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 KANTRA0A1W2PQU2 76 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-225ENST00000586385 I3L3M4 83 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms