RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 IGHV1OR15-1A0A075B7D0 117 aa13.61□□□□□ -0.23
CACTIN-204ENST00000585942 K7EQG2 157 aa13.61□□□□□ -0.23
CACTIN-204ENST00000585942 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
CACTIN-204ENST00000585942 IGHV3-73A0A0B4J1V6 119 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 TRBV6-5A0A0K0K1A5 114 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 PPDPFQ9H3Y8 114 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 VPREB3Q9UKI3 123 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 LRRK2Q5S007 2527 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 YAE1D1Q9NRH1 226 aa13.6□□□□□ -0.23
CACTIN-204ENST00000585942 AMELXQ99217 191 aa13.59□□□□□ -0.23
CACTIN-204ENST00000585942 J3QQQ9 107 aa13.59□□□□□ -0.23
CACTIN-204ENST00000585942 M0QXV9 152 aa13.59□□□□□ -0.23
CACTIN-204ENST00000585942 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
CACTIN-204ENST00000585942 ABCA12Q86UK0 2595 aa13.58□□□□□ -0.23
CACTIN-204ENST00000585942 PTPN13Q12923 2485 aa13.58□□□□□ -0.24
CACTIN-204ENST00000585942 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
CACTIN-204ENST00000585942 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
CACTIN-204ENST00000585942 PROK1P58294 105 aa13.58□□□□□ -0.24
CACTIN-204ENST00000585942 RBMY1FQ15415 496 aaKnown RBP13.58□□□□□ -0.24
CACTIN-204ENST00000585942 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.24
CACTIN-204ENST00000585942 TLN2Q9Y4G6 2542 aa13.57□□□□□ -0.24
CACTIN-204ENST00000585942 ELANEP08246 267 aa13.57□□□□□ -0.24
CACTIN-204ENST00000585942 ZNF469Q96JG9 3925 aaPredicted RBP13.57□□□□□ -0.24
CACTIN-204ENST00000585942 A4D1N5 150 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-204ENST00000585942 CHCHD5Q9BSY4 110 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 Q9UF83 564 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 KNCNA6PVL3 124 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 EIF4EBP3O60516 100 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-204ENST00000585942 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
CACTIN-204ENST00000585942 DEFB136Q30KP8 78 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 LGALS3P17931 250 aaKnown RBP13.55□□□□□ -0.24
CACTIN-204ENST00000585942 C18orf65Q6ZTR6 163 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 C20orf203Q8NBC4 194 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 SPANXA1Q9NS26 97 aa13.55□□□□□ -0.24
CACTIN-204ENST00000585942 NSUN5P1Q3KNT7 163 aa13.54□□□□□ -0.24
CACTIN-204ENST00000585942 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
CACTIN-204ENST00000585942 CEMP1Q6PRD7 247 aaPredicted RBP13.54□□□□□ -0.24
CACTIN-204ENST00000585942 Q1RN00 199 aa13.54□□□□□ -0.24
CACTIN-204ENST00000585942 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
CACTIN-204ENST00000585942 I3L3M4 83 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 TMEM223A0PJW6 202 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 H3BMM0 161 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 RPL13AP40429 203 aaKnown RBP13.53□□□□□ -0.24
CACTIN-204ENST00000585942 ATXN8Q156A1 80 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 RNASE13Q5GAN3 156 aaKnown RBP13.53□□□□□ -0.24
CACTIN-204ENST00000585942 UBE2WQ96B02 151 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 CHD6Q8TD26 2715 aa13.53□□□□□ -0.24
CACTIN-204ENST00000585942 NF1P21359 2839 aa13.52□□□□□ -0.24
CACTIN-204ENST00000585942 ZNF22P17026 224 aaPredicted RBP13.52□□□□□ -0.24
CACTIN-204ENST00000585942 RHOHQ15669 191 aa13.52□□□□□ -0.24
CACTIN-204ENST00000585942 LINC01356Q8N9X3 169 aa13.52□□□□□ -0.24
CACTIN-204ENST00000585942 IGLV4-3A0A075B6K6 122 aa13.52□□□□□ -0.25
CACTIN-204ENST00000585942 TMEM263Q8WUH6 116 aaKnown RBP13.52□□□□□ -0.25
CACTIN-204ENST00000585942 AKAP9Q99996 3911 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 ADARB2-AS1A8MUL3 147 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 SLURP1P55000 103 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 DUX3Q96PT4 197 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 LINC01587Q99440 93 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
CACTIN-204ENST00000585942 SPXQ9BT56 116 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 TMEM126AQ9H061 195 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 NACAE9PAV3 2078 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 DEFB131AP59861 70 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 NAV2Q8IVL1 2488 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 EPG5Q9HCE0 2579 aa13.5□□□□□ -0.25
CACTIN-204ENST00000585942 FAM104AQ969W3 186 aa13.49□□□□□ -0.25
CACTIN-204ENST00000585942 NIPBLQ6KC79 2804 aaeCLIP13.49□□□□□ -0.25
CACTIN-204ENST00000585942 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
CACTIN-204ENST00000585942 LEPROTO15243 131 aa13.49□□□□□ -0.25
CACTIN-204ENST00000585942 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
CACTIN-204ENST00000585942 Q6ZSN1 163 aa13.48□□□□□ -0.25
CACTIN-204ENST00000585942 WNK1Q9H4A3 2382 aa13.48□□□□□ -0.25
CACTIN-204ENST00000585942 PRRC2AP48634 2157 aaKnown RBP13.48□□□□□ -0.25
CACTIN-204ENST00000585942 A0A096LNT2 108 aa13.48□□□□□ -0.25
CACTIN-204ENST00000585942 MUSTN1Q8IVN3 82 aa13.48□□□□□ -0.25
CACTIN-204ENST00000585942 SONP18583 2426 aaKnown RBP13.47□□□□□ -0.25
CACTIN-204ENST00000585942 TRGV11A0A075B6L2 103 aa13.47□□□□□ -0.25
CACTIN-204ENST00000585942 TMEM89A2RUT3 159 aa13.47□□□□□ -0.25
CACTIN-204ENST00000585942 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
CACTIN-204ENST00000585942 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
CACTIN-204ENST00000585942 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
CACTIN-204ENST00000585942 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
CACTIN-204ENST00000585942 TRAV8-3A0A0A6YYJ7 113 aa13.47□□□□□ -0.25
CACTIN-204ENST00000585942 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
CACTIN-204ENST00000585942 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
CACTIN-204ENST00000585942 A0A0B4J2C4 111 aa13.46□□□□□ -0.25
CACTIN-204ENST00000585942 CD28P10747 220 aa13.46□□□□□ -0.25
CACTIN-204ENST00000585942 A8MZ25 164 aa13.45□□□□□ -0.26
CACTIN-204ENST00000585942 TRIAP1O43715 76 aa13.45□□□□□ -0.26
CACTIN-204ENST00000585942 LINC00694P0DN24 101 aa13.45□□□□□ -0.26
CACTIN-204ENST00000585942 IGHV3-30-3P0DP02 117 aa13.44□□□□□ -0.26
CACTIN-204ENST00000585942 DSCR9P59020 149 aa13.44□□□□□ -0.26
CACTIN-204ENST00000585942 MRPL23Q16540 153 aaKnown RBP13.43□□□□□ -0.26
CACTIN-204ENST00000585942 Q6YL49 198 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms