RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
HMG20B-215ENST00000585741 IFI27P40305 119 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-215ENST00000585741 AMTP48728 403 aa11.73□□□□□ -0.53
HMG20B-215ENST00000585741 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
HMG20B-215ENST00000585741 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
HMG20B-215ENST00000585741 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
HMG20B-215ENST00000585741 RNASEKQ6P5S7 137 aaKnown RBP11.72□□□□□ -0.53
HMG20B-215ENST00000585741 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
HMG20B-215ENST00000585741 KMT2AQ03164 3969 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 UBE2L6O14933 153 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BKO60814 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BJP06899 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BOP23527 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BBP33778 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BDP58876 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BCP62807 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 Q0VG73 95 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.53
HMG20B-215ENST00000585741 LYPD5Q6UWN5 251 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
HMG20B-215ENST00000585741 HERC2O95714 4834 aa11.71□□□□□ -0.54
HMG20B-215ENST00000585741 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 K7EMI3 77 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 LINC00614P0C842 121 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 G0S2P27469 103 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 LAGE3Q14657 143 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 LELP1Q5T871 98 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 NIT1Q86X76 327 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
HMG20B-215ENST00000585741 TSHBP01222 138 aa11.69□□□□□ -0.54
HMG20B-215ENST00000585741 TIRAPP58753 221 aa11.69□□□□□ -0.54
HMG20B-215ENST00000585741 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
HMG20B-215ENST00000585741 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
HMG20B-215ENST00000585741 S100A6P06703 90 aa11.68□□□□□ -0.54
HMG20B-215ENST00000585741 NDUFA6P56556 154 aa11.68□□□□□ -0.54
HMG20B-215ENST00000585741 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
HMG20B-215ENST00000585741 ESRGQ1W209 222 aa11.68□□□□□ -0.54
HMG20B-215ENST00000585741 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
HMG20B-215ENST00000585741 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
HMG20B-215ENST00000585741 HSBP1O75506 76 aa11.67□□□□□ -0.54
HMG20B-215ENST00000585741 PKIAP61925 76 aa11.67□□□□□ -0.54
HMG20B-215ENST00000585741 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
HMG20B-215ENST00000585741 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
HMG20B-215ENST00000585741 AMMECR1LQ6DCA0 310 aa11.65□□□□□ -0.54
HMG20B-215ENST00000585741 NTM-AS1Q6ZSK4 140 aa11.65□□□□□ -0.54
HMG20B-215ENST00000585741 LINC00476Q8WZB0 136 aa11.65□□□□□ -0.54
HMG20B-215ENST00000585741 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
HMG20B-215ENST00000585741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-215ENST00000585741 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-215ENST00000585741 SERF1AO75920 110 aa11.64□□□□□ -0.55
HMG20B-215ENST00000585741 GAGE6Q13070 117 aa11.64□□□□□ -0.55
HMG20B-215ENST00000585741 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
HMG20B-215ENST00000585741 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
HMG20B-215ENST00000585741 A0A087WX48 190 aa11.63□□□□□ -0.55
HMG20B-215ENST00000585741 H7C423 109 aa11.63□□□□□ -0.55
HMG20B-215ENST00000585741 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
HMG20B-215ENST00000585741 TMEM101Q96IK0 257 aa11.63□□□□□ -0.55
HMG20B-215ENST00000585741 CHCHD7Q9BUK0 85 aa11.63□□□□□ -0.55
HMG20B-215ENST00000585741 LINC01546A6NGU7 62 aa11.62□□□□□ -0.55
HMG20B-215ENST00000585741 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
HMG20B-215ENST00000585741 C2orf66Q6UXQ4 117 aa11.62□□□□□ -0.55
HMG20B-215ENST00000585741 C20orf203Q8NBC4 194 aa11.62□□□□□ -0.55
HMG20B-215ENST00000585741 HBDP02042 147 aa11.61□□□□□ -0.55
HMG20B-215ENST00000585741 ESDP10768 282 aa11.61□□□□□ -0.55
HMG20B-215ENST00000585741 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
HMG20B-215ENST00000585741 TMA7Q9Y2S6 64 aaKnown RBP11.61□□□□□ -0.55
HMG20B-215ENST00000585741 SIVA1O15304 175 aa11.6□□□□□ -0.55
HMG20B-215ENST00000585741 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
HMG20B-215ENST00000585741 WFDC10BQ8IUB3 73 aa11.6□□□□□ -0.55
HMG20B-215ENST00000585741 FGF6P10767 208 aa11.59□□□□□ -0.55
HMG20B-215ENST00000585741 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
HMG20B-215ENST00000585741 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
HMG20B-215ENST00000585741 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
HMG20B-215ENST00000585741 ZNF25P17030 456 aaPredicted RBP11.58□□□□□ -0.56
HMG20B-215ENST00000585741 S100A2P29034 98 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 FAM19A2Q8N3H0 131 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 TOMM6Q96B49 74 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 SPANXA1Q9NS26 97 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
HMG20B-215ENST00000585741 TRAV9-2A0A087WT02 112 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 LY6G6CO95867 125 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 IGHV3-30P01768 117 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 IGHV3-33P01772 117 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 IGHV3-30-3P0DP02 117 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 IGHV3-30-5P0DP03 117 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
HMG20B-215ENST00000585741 LGALS9CQ6DKI2 356 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 Q9H8V8 135 aa11.57□□□□□ -0.56
HMG20B-215ENST00000585741 Q6ZN92 141 aa11.56□□□□□ -0.56
HMG20B-215ENST00000585741 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
HMG20B-215ENST00000585741 NUPR1O60356 82 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms