RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 ATP6V0E2Q8NHE4 81 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 LOC389332A0A1B0GUA5 103 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 NUPR2A6NF83 97 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 HBDP02042 147 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 NANOS2P60321 138 aaKnown RBP6.45□□□□□ -1.38
CASC3-209ENST00000583902 PAPPA-AS1Q5QFB9 102 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 RNASEKQ6P5S7 137 aaKnown RBP6.45□□□□□ -1.38
CASC3-209ENST00000583902 VSIG2Q96IQ7 327 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 KLK5Q9Y337 293 aaPredicted RBP6.45□□□□□ -1.38
CASC3-209ENST00000583902 TENM3Q9P273 2699 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 STAB2Q8WWQ8 2551 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
CASC3-209ENST00000583902 TRBV25-1A0A075B6N4 114 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 ATP5LO75964 103 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 NUDT3O95989 172 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 IQCJQ1A5X6 159 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 CYSLTR1Q9Y271 337 aa6.44□□□□□ -1.38
CASC3-209ENST00000583902 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
CASC3-209ENST00000583902 IGHV1-24A0A0C4DH33 117 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 GAGE12JA6NER3 117 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 TSHBP01222 138 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 HTN3P15516 51 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 ZNF25P17030 456 aaPredicted RBP6.43□□□□□ -1.38
CASC3-209ENST00000583902 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
CASC3-209ENST00000583902 AMTP48728 403 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 SNRPEP62304 92 aaKnown RBP6.43□□□□□ -1.38
CASC3-209ENST00000583902 GAGE1Q13065 139 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 GAGE4Q13068 117 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 GAGE5Q13069 117 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 GAGE13Q4V321 117 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 PHLDA1Q8WV24 401 aaPredicted RBP6.43□□□□□ -1.38
CASC3-209ENST00000583902 TOMM6Q96B49 74 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
CASC3-209ENST00000583902 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 LEPROTL1O95214 131 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 P0DMU3 169 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 C2orf66Q6UXQ4 117 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 ERASQ7Z444 233 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 HIST3H2BBQ8N257 126 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 TMEM141Q96I45 108 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 TMEM243Q9BU79 118 aa6.42□□□□□ -1.38
CASC3-209ENST00000583902 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
CASC3-209ENST00000583902 A0A096LPF7 62 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 TRAV8-6A0A0B4J262 113 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 A0A0J9YY99 117 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 K7EP13 123 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 UBE2L6O14933 153 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 LINC00310P59036 64 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 LELP1Q5T871 98 aa6.41□□□□□ -1.38
CASC3-209ENST00000583902 CEMP1Q6PRD7 247 aaPredicted RBP6.41□□□□□ -1.38
CASC3-209ENST00000583902 MRPL52Q86TS9 123 aaKnown RBP6.41□□□□□ -1.38
CASC3-209ENST00000583902 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.4□□□□□ -1.38
CASC3-209ENST00000583902 CCL18P55774 89 aa6.4□□□□□ -1.38
CASC3-209ENST00000583902 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
CASC3-209ENST00000583902 PDZD11Q5EBL8 140 aa6.4□□□□□ -1.38
CASC3-209ENST00000583902 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
CASC3-209ENST00000583902 TMEM101Q96IK0 257 aa6.4□□□□□ -1.38
CASC3-209ENST00000583902 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
CASC3-209ENST00000583902 CCL25O15444 150 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 DGAT2L7PQ6IED9 249 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 Q6ZN92 141 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 SCGB3A1Q96QR1 104 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 HIST1H2BLQ99880 126 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
CASC3-209ENST00000583902 TRAV12-1A0A0B4J245 112 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 IGHV3-38A0A0C4DH36 116 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 NUPR1O60356 82 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 LYPD5Q6UWN5 251 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 UPK3BQ9BT76 320 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 Q9UF83 564 aa6.38□□□□□ -1.39
CASC3-209ENST00000583902 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 A0A096LNJ9 63 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 C20orf202A1L168 122 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 IGLL5B9A064 214 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 EREGO14944 169 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 FABP4P15090 132 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 SEC11AP67812 179 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 FAM19A2Q8N3H0 131 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 CHCHD5Q9BSY4 110 aa6.37□□□□□ -1.39
CASC3-209ENST00000583902 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms