RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KLK5Q9Y337 293 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-216ENST00000583804 PAX4O43316 350 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 ST20Q9HBF5 79 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 PRO0255Q9UI72 69 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 MRPS16Q9Y3D3 137 aaKnown RBP7.68□□□□□ -1.18
TOP3A-216ENST00000583804 PPBPP02775 128 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 CRYBA4P53673 196 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 FA2HQ7L5A8 372 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 NRACQ8N912 160 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 MRAP2Q96G30 205 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
TOP3A-216ENST00000583804 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 LINC01546A6NGU7 62 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 C3orf84H3BNL1 204 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
TOP3A-216ENST00000583804 GAGE1Q13065 139 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 GAGE4Q13068 117 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 GAGE5Q13069 117 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 PRSS3P2Q8NHM4 247 aa7.67□□□□□ -1.18
TOP3A-216ENST00000583804 IGHV3-38A0A0C4DH36 116 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 M0QY20 66 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 TCAPO15273 167 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 NUDT3O95989 172 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 Q6ZN92 141 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 VSIG2Q96IQ7 327 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 PRADC1Q9BSG0 188 aa7.66□□□□□ -1.18
TOP3A-216ENST00000583804 A0A096LPF7 62 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 K7EQD1 137 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 GYPEP15421 78 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 RHOHQ15669 191 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 COL5A1-AS1Q5SY13 56 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 CASC10Q5T4H9 136 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 ATOH7Q8N100 152 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
TOP3A-216ENST00000583804 A0A096LNJ9 63 aa7.64□□□□□ -1.19
TOP3A-216ENST00000583804 IFI27P40305 119 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-216ENST00000583804 MAJINQ3KP22 176 aa7.64□□□□□ -1.19
TOP3A-216ENST00000583804 NEXN-AS1Q8NBZ9 246 aa7.64□□□□□ -1.19
TOP3A-216ENST00000583804 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 H3BNG1 76 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 H7C1H1 209 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 HBDP02042 147 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 C15orf53Q8NAA6 179 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 ZNRF2Q8NHG8 242 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 DNAH7Q8WXX0 4024 aa7.63□□□□□ -1.19
TOP3A-216ENST00000583804 PRSS47A8MTI9 375 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
TOP3A-216ENST00000583804 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
TOP3A-216ENST00000583804 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 APLNQ9ULZ1 77 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 TCTAP57738 103 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 SMIM2Q9BVW6 85 aa7.62□□□□□ -1.19
TOP3A-216ENST00000583804 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
TOP3A-216ENST00000583804 TRBV10-1A0A0K0K1A3 114 aa7.61□□□□□ -1.19
TOP3A-216ENST00000583804 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
TOP3A-216ENST00000583804 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
TOP3A-216ENST00000583804 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
TOP3A-216ENST00000583804 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
TOP3A-216ENST00000583804 TRBV7-3A0A075B6L6 115 aa7.6□□□□□ -1.19
TOP3A-216ENST00000583804 hDV102S1A0JD36 115 aa7.6□□□□□ -1.19
TOP3A-216ENST00000583804 DLEU1O43261 78 aa7.6□□□□□ -1.19
TOP3A-216ENST00000583804 FCER1GP30273 86 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 BATFQ16520 125 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 SH2D6Q7Z4S9 175 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 STPG4Q8N801 248 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 Q8N8P6 123 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 ATP6V0E2Q8NHE4 81 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 C20orf78Q9BR46 151 aa7.59□□□□□ -1.19
TOP3A-216ENST00000583804 IGLV2-18A0A075B6J9 118 aa7.58□□□□□ -1.2
TOP3A-216ENST00000583804 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
TOP3A-216ENST00000583804 PPP1R17O96001 155 aa7.58□□□□□ -1.2
TOP3A-216ENST00000583804 COX8AP10176 69 aa7.58□□□□□ -1.2
TOP3A-216ENST00000583804 ZNF25P17030 456 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-216ENST00000583804 IFI27L1Q96BM0 104 aa7.58□□□□□ -1.2
TOP3A-216ENST00000583804 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 VCYO14598 125 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 TSHBP01222 138 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
TOP3A-216ENST00000583804 CCL18P55774 89 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 UBE2D3P61077 147 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 UBE2D2P62837 147 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 ESRGQ1W209 222 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 LYPD5Q6UWN5 251 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 UBE2DNLQ8IWF7 75 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
TOP3A-216ENST00000583804 DYNC2H1Q8NCM8 4307 aaKnown RBP7.57□□□□□ -1.2
TOP3A-216ENST00000583804 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms