RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PPP3R2Q96LZ3 170 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 AQP10Q96PS8 301 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 FAM103A1Q9BTL3 118 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 FAM107BQ9H098 131 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 AGPAT4-IT1Q9H0P7 198 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 PROK2Q9HC23 129 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 SERP1Q9Y6X1 66 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 SPTBN1Q01082 2364 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 MYOM2P54296 1465 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 MBD5Q9P267 1494 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 NUP188Q5SRE5 1749 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 PPIP5K1Q6PFW1 1433 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 ROBO1Q9Y6N7 1651 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 ANKRD36A6QL64 1941 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 IBTKQ9P2D0 1353 aaPredicted RBP0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 BTAF1O14981 1849 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 SSC5DA1L4H1 1573 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 ZNF292O60281 2723 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 A0A087WTM6 91 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 TRAV13-2A0A0B4J235 113 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 TMEM14DPA8MWL7 114 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 M0R129 80 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 TNFP01375 233 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 IFNGP01579 166 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 APOC2P02655 101 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 ACYP2P14621 99 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 HIST1H1DP16402 221 aaKnown RBP0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 EDDM3BP56851 147 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 NPC2P61916 151 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 UBE2G1P62253 170 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 INSL4Q14641 139 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 BAGE3Q86Y29 109 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 C8orf59Q8N0T1 100 aaPredicted RBP0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 C10orf82Q8WW14 230 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 TMEM203Q969S6 136 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 SEC11CQ9BY50 192 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 CYP4F30PQ9H0H9 118 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 LENEPQ9Y5L5 61 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 MEGF8Q7Z7M0 2845 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 TOPAZ1Q8N9V7 1692 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 NCOR2Q9Y618 2525 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 ZNF609O15014 1411 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 CASKIN1Q8WXD9 1431 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
SMCHD1-206ENST00000581631 DIP2CQ9Y2E4 1556 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 SPHKAPQ2M3C7 1700 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 GOLGA3Q08378 1498 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 GVQW2A0A096LPI5 108 aaPredicted RBP0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 TRAV1-2A0A0B4J238 106 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 LOC285095A0A1B0GVY8 99 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 SSSCA1O60232 199 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 GNG7O60262 68 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 AKAIN1P0CW23 69 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 GCHFRP30047 84 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 CCL18P55774 89 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 ATP5EP56381 51 aaPredicted RBP0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 MRPS10P82664 201 aaKnown RBP0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 COX6A2Q02221 97 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 MEIG1Q5JSS6 88 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 SPINK6Q6UWN8 80 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 SPTSSBQ8NFR3 76 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 SMIM4Q8WVI0 70 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 PP6455Q8WZ26 134 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 Q96NJ1 140 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 AMELXQ99217 191 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 WFDC6Q9BQY6 131 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 R4GMQ9 66 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 ZNF236Q9UL36 1845 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 BIVM-ERCC5R4GMW8 1640 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 CPSF1Q10570 1443 aaKnown RBP0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 NCOA3Q9Y6Q9 1424 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 OTOGQ6ZRI0 2925 aa0.19□□□□□ -2.38
SMCHD1-206ENST00000581631 URB1O60287 2271 aaKnown RBP0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 MRC1P22897 1456 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 TRGV1A0A0A0MS02 117 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 A0A0D9SFI3 127 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 CLPSL1A2RUU4 121 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 MIF4GDA9UHW6 222 aaKnown RBP0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 HCG22E2RYF7 251 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 DLEU1O43261 78 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 TFF1P04155 84 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 SPINK8P0C7L1 97 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 S100A3P33764 101 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 GNG4P50150 75 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 TPPP2P59282 170 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 COX17Q14061 63 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 WHAMMP3Q1A5X7 153 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 Q6ZRX8 168 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 COMMD6Q7Z4G1 85 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 UBE2DNLQ8IWF7 75 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 Q8N8P6 123 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 MYOZ3Q8TDC0 251 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 MGST2Q99735 147 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 SMR3AQ99954 134 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 IER3IP1Q9Y5U9 82 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 LINC00312Q9Y6C7 94 aa0.18□□□□□ -2.38
SMCHD1-206ENST00000581631 AKAP12Q02952 1782 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms