RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ADIRFQ15847 76 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 A0A1B0GUT8 65 aa10.95□□□□□ -0.66
SREBF1-219ENST00000580540 HLA-DQA1P01909 254 aa10.95□□□□□ -0.66
SREBF1-219ENST00000580540 MIAQ16674 131 aa10.95□□□□□ -0.66
SREBF1-219ENST00000580540 FRZBQ92765 325 aa10.95□□□□□ -0.66
SREBF1-219ENST00000580540 GFRA4Q9GZZ7 299 aa10.95□□□□□ -0.66
SREBF1-219ENST00000580540 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
SREBF1-219ENST00000580540 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
SREBF1-219ENST00000580540 NAT8Q9UHE5 227 aa10.94□□□□□ -0.66
SREBF1-219ENST00000580540 V9GYV3 84 aa10.94□□□□□ -0.66
SREBF1-219ENST00000580540 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
SREBF1-219ENST00000580540 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
SREBF1-219ENST00000580540 TMEM70Q9BUB7 260 aa10.93□□□□□ -0.66
SREBF1-219ENST00000580540 DNAH8Q96JB1 4490 aa10.93□□□□□ -0.66
SREBF1-219ENST00000580540 IGLV10-54A0A075B6I4 117 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 EPM2AB3EWF7 344 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 REG3AQ06141 175 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 RIGQ13278 110 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 C20orf203Q8NBC4 194 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 PRR34Q9NV39 138 aa10.92□□□□□ -0.66
SREBF1-219ENST00000580540 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 TMEM191AQ9H0A3 160 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
SREBF1-219ENST00000580540 A0A1B0GUV1 79 aa10.9□□□□□ -0.66
SREBF1-219ENST00000580540 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
SREBF1-219ENST00000580540 GAS8-AS1O95177 125 aa10.9□□□□□ -0.66
SREBF1-219ENST00000580540 PMCHP20382 165 aa10.9□□□□□ -0.66
SREBF1-219ENST00000580540 SMDT1Q9H4I9 107 aa10.9□□□□□ -0.66
SREBF1-219ENST00000580540 FAT1Q14517 4588 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 APCSP02743 223 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 ST20Q9HBF5 79 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 NAT8BQ9UHF3 227 aa10.89□□□□□ -0.67
SREBF1-219ENST00000580540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-219ENST00000580540 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
SREBF1-219ENST00000580540 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-219ENST00000580540 I3L3M4 83 aa10.88□□□□□ -0.67
SREBF1-219ENST00000580540 NCR2O95944 276 aa10.88□□□□□ -0.67
SREBF1-219ENST00000580540 RAB4AP20338 218 aa10.88□□□□□ -0.67
SREBF1-219ENST00000580540 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
SREBF1-219ENST00000580540 RNF185Q96GF1 192 aa10.88□□□□□ -0.67
SREBF1-219ENST00000580540 Q5VSD8 79 aa10.87□□□□□ -0.67
SREBF1-219ENST00000580540 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 SMKR1H3BMG3 65 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 RPS10P46783 165 aaKnown RBP10.86□□□□□ -0.67
SREBF1-219ENST00000580540 CAMPP49913 170 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 RAB14P61106 215 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 MRAP2Q96G30 205 aa10.86□□□□□ -0.67
SREBF1-219ENST00000580540 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
SREBF1-219ENST00000580540 PRSS1P07477 247 aa10.85□□□□□ -0.67
SREBF1-219ENST00000580540 TMEM242Q9NWH2 141 aa10.85□□□□□ -0.67
SREBF1-219ENST00000580540 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
SREBF1-219ENST00000580540 FGF6P10767 208 aa10.84□□□□□ -0.67
SREBF1-219ENST00000580540 H7C423 109 aa10.82□□□□□ -0.68
SREBF1-219ENST00000580540 TSHBP01222 138 aa10.82□□□□□ -0.68
SREBF1-219ENST00000580540 POLR2KP53803 58 aaKnown RBP10.82□□□□□ -0.68
SREBF1-219ENST00000580540 MRPL54Q6P161 138 aaKnown RBP10.82□□□□□ -0.68
SREBF1-219ENST00000580540 Q6ZSA8 131 aa10.82□□□□□ -0.68
SREBF1-219ENST00000580540 BTF3L4Q96K17 158 aa10.82□□□□□ -0.68
SREBF1-219ENST00000580540 GAGE12HA6NDE8 117 aa10.81□□□□□ -0.68
SREBF1-219ENST00000580540 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
SREBF1-219ENST00000580540 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
SREBF1-219ENST00000580540 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
SREBF1-219ENST00000580540 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
SREBF1-219ENST00000580540 A0A1B0GW15 77 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 VCYO14598 125 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 PPP1R17O96001 155 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 FCER1GP30273 86 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
SREBF1-219ENST00000580540 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 ESDP10768 282 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 CKS2P33552 79 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
SREBF1-219ENST00000580540 DGAT2L7PQ6IED9 249 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 NRACQ8N912 160 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
SREBF1-219ENST00000580540 VPS13BQ7Z7G8 4022 aa10.78□□□□□ -0.68
SREBF1-219ENST00000580540 C7orf77A4D0Y5 90 aa10.78□□□□□ -0.68
SREBF1-219ENST00000580540 S100A8P05109 93 aa10.78□□□□□ -0.68
SREBF1-219ENST00000580540 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-219ENST00000580540 CHCHD10Q8WYQ3 142 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-219ENST00000580540 AP5S1Q9NUS5 200 aa10.78□□□□□ -0.68
SREBF1-219ENST00000580540 F8W036 122 aa10.77□□□□□ -0.69
SREBF1-219ENST00000580540 HBBP68871 147 aa10.77□□□□□ -0.69
SREBF1-219ENST00000580540 KIR2DL4Q99706 377 aa10.77□□□□□ -0.69
SREBF1-219ENST00000580540 CHAC1Q9BUX1 264 aa10.77□□□□□ -0.69
SREBF1-219ENST00000580540 PPP1R2P9O14990 202 aa10.76□□□□□ -0.69
SREBF1-219ENST00000580540 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
SREBF1-219ENST00000580540 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
SREBF1-219ENST00000580540 C9orf163Q8N9P6 203 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms