RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
PPP4R1-215ENST00000580182 CLPSL2Q6UWE3 100 aa12.35□□□□□ -0.43
PPP4R1-215ENST00000580182 RMI2Q96E14 147 aa12.35□□□□□ -0.43
PPP4R1-215ENST00000580182 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 SMKR1H3BMG3 65 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 CRPP02741 224 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 RPS10P46783 165 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 AMTP48728 403 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 Q0VG73 95 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 KRTAP17-1Q9BYP8 105 aa12.34□□□□□ -0.43
PPP4R1-215ENST00000580182 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
PPP4R1-215ENST00000580182 KRTAP10-1P60331 282 aa12.33□□□□□ -0.44
PPP4R1-215ENST00000580182 LINC00269Q8N2A0 174 aa12.33□□□□□ -0.44
PPP4R1-215ENST00000580182 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
PPP4R1-215ENST00000580182 COX11Q9Y6N1 276 aa12.33□□□□□ -0.44
PPP4R1-215ENST00000580182 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
PPP4R1-215ENST00000580182 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
PPP4R1-215ENST00000580182 NCR2O95944 276 aa12.32□□□□□ -0.44
PPP4R1-215ENST00000580182 CAMPP49913 170 aa12.32□□□□□ -0.44
PPP4R1-215ENST00000580182 IGLV5-52A0A0A0MRZ9 124 aa12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 MRPL54Q6P161 138 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 C1orf43Q9BWL3 253 aa12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 ST20Q9HBF5 79 aa12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
PPP4R1-215ENST00000580182 UBE2L6O14933 153 aa12.3□□□□□ -0.44
PPP4R1-215ENST00000580182 PMCHP20382 165 aa12.3□□□□□ -0.44
PPP4R1-215ENST00000580182 GCSHP23434 173 aa12.3□□□□□ -0.44
PPP4R1-215ENST00000580182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 A0A1B0GUV1 79 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 IGKV2-29A2NJV5 120 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 I3L3M4 83 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 MIAQ16674 131 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 NTN5Q8WTR8 489 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 DNAH8Q96JB1 4490 aa12.29□□□□□ -0.44
PPP4R1-215ENST00000580182 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 APCSP02743 223 aa12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 REG3AQ06141 175 aa12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 NRACQ8N912 160 aa12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
PPP4R1-215ENST00000580182 A0A1B0GXF2 115 aa12.27□□□□□ -0.45
PPP4R1-215ENST00000580182 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
PPP4R1-215ENST00000580182 TSHBP01222 138 aa12.27□□□□□ -0.45
PPP4R1-215ENST00000580182 ADCYAP1P18509 176 aa12.27□□□□□ -0.45
PPP4R1-215ENST00000580182 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.45
PPP4R1-215ENST00000580182 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
PPP4R1-215ENST00000580182 A0A1B0GW15 77 aa12.26□□□□□ -0.45
PPP4R1-215ENST00000580182 HLA-DQA1P01909 254 aa12.26□□□□□ -0.45
PPP4R1-215ENST00000580182 HBBP68871 147 aa12.26□□□□□ -0.45
PPP4R1-215ENST00000580182 TRBV27A0A0K0K1C4 114 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 ESDP10768 282 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 XGP55808 180 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 UQCC3Q6UW78 93 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 ANAPC16Q96DE5 110 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 KRTAP4-5Q9BYR2 181 aa12.24□□□□□ -0.45
PPP4R1-215ENST00000580182 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
PPP4R1-215ENST00000580182 FGF6P10767 208 aa12.23□□□□□ -0.45
PPP4R1-215ENST00000580182 SUMO2P61956 95 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-215ENST00000580182 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
PPP4R1-215ENST00000580182 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-215ENST00000580182 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 F8W036 122 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 H7C423 109 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 VCYO14598 125 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 S100A8P05109 93 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 CKS2P33552 79 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 LINC01620Q4KN68 170 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 COMMD7Q86VX2 200 aa12.22□□□□□ -0.45
PPP4R1-215ENST00000580182 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 LINC00862A6NCI5 91 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 D6R8Y8 96 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 PPP1R17O96001 155 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 HAMPP81172 84 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.45
PPP4R1-215ENST00000580182 ABCA13Q86UQ4 5058 aa12.21□□□□□ -0.46
PPP4R1-215ENST00000580182 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
PPP4R1-215ENST00000580182 FAM30AQ9NZY2 134 aa12.2□□□□□ -0.46
PPP4R1-215ENST00000580182 TRBV24-1A0A075B6N3 115 aa12.19□□□□□ -0.46
PPP4R1-215ENST00000580182 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
PPP4R1-215ENST00000580182 NPYP01303 97 aa12.18□□□□□ -0.46
PPP4R1-215ENST00000580182 FCER1GP30273 86 aa12.18□□□□□ -0.46
PPP4R1-215ENST00000580182 FAT1Q14517 4588 aa12.18□□□□□ -0.46
PPP4R1-215ENST00000580182 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
PPP4R1-215ENST00000580182 PRSS1P07477 247 aa12.17□□□□□ -0.46
PPP4R1-215ENST00000580182 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
PPP4R1-215ENST00000580182 Q8N1X5 172 aa12.17□□□□□ -0.46
PPP4R1-215ENST00000580182 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
PPP4R1-215ENST00000580182 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-215ENST00000580182 TMEM101Q96IK0 257 aa12.16□□□□□ -0.46
PPP4R1-215ENST00000580182 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
PPP4R1-215ENST00000580182 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
PPP4R1-215ENST00000580182 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
PPP4R1-215ENST00000580182 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms