RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NCR2O95944 276 aa7.68□□□□□ -1.18
CDK5RAP3-204ENST00000577664 SRIP30626 198 aa7.68□□□□□ -1.18
CDK5RAP3-204ENST00000577664 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
CDK5RAP3-204ENST00000577664 PKD1P98161 4303 aa7.68□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 I3L3M4 83 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TCAPO15273 167 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 Q0VG73 95 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GAGE1Q13065 139 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GAGE4Q13068 117 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GAGE5Q13069 117 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 LINC00336Q6ZUF6 198 aa7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.67□□□□□ -1.18
CDK5RAP3-204ENST00000577664 ESRGQ1W209 222 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 LGALS9CQ6DKI2 356 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 Q8N8P6 123 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 C18orf32Q8TCD1 76 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NXT2Q9NPJ8 142 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NUDT3O95989 172 aa7.65□□□□□ -1.18
CDK5RAP3-204ENST00000577664 IQCJQ1A5X6 159 aa7.65□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
CDK5RAP3-204ENST00000577664 UPK3BQ9BT76 320 aa7.65□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 TSHBP01222 138 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 ESDP10768 282 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 PMCHP20382 165 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LELP1Q5T871 98 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
CDK5RAP3-204ENST00000577664 H7C423 109 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BKO60814 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BJP06899 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LINC00614P0C842 121 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BOP23527 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BBP33778 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 IFI27P40305 119 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 CCL18P55774 89 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BDP58876 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BCP62807 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 COTL1Q14019 142 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST2H2BEQ16778 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BHQ93079 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BNQ99877 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 HIST1H2BMQ99879 126 aa7.63□□□□□ -1.19
CDK5RAP3-204ENST00000577664 RAB5BP61020 215 aa7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 NIT1Q86X76 327 aa7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 PRSS3P2Q8NHM4 247 aa7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
CDK5RAP3-204ENST00000577664 TRBV25-1A0A075B6N4 114 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 IGHV1-24A0A0C4DH33 117 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 IGHV3-38A0A0C4DH36 116 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 C1orf196B1AJZ1 125 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 G0S2P27469 103 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 ORMDL2Q53FV1 153 aa7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 CHCHD1Q96BP2 118 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-204ENST00000577664 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
CDK5RAP3-204ENST00000577664 K7EP13 123 aa7.6□□□□□ -1.19
CDK5RAP3-204ENST00000577664 LAGE3Q14657 143 aa7.6□□□□□ -1.19
CDK5RAP3-204ENST00000577664 C20orf203Q8NBC4 194 aa7.6□□□□□ -1.19
CDK5RAP3-204ENST00000577664 CSDC2Q9Y534 153 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-204ENST00000577664 TRAV8-6A0A0B4J262 113 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 NPSP0C0P6 89 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 FCER1GP30273 86 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 PKIAP61925 76 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 MRPL52Q86TS9 123 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 TIMM21Q9BVV7 248 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
CDK5RAP3-204ENST00000577664 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.2
CDK5RAP3-204ENST00000577664 CDK2AP2O75956 126 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 AMTP48728 403 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 LINC00310P59036 64 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 MAPKAPK5-AS1Q8N8E1 139 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 TMEM243Q9BU79 118 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 PYGO1Q9Y3Y4 419 aa7.58□□□□□ -1.2
CDK5RAP3-204ENST00000577664 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-204ENST00000577664 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
CDK5RAP3-204ENST00000577664 BAGE3Q86Y29 109 aa7.57□□□□□ -1.2
CDK5RAP3-204ENST00000577664 Q8N1X5 172 aa7.57□□□□□ -1.2
CDK5RAP3-204ENST00000577664 TOMM6Q96B49 74 aa7.57□□□□□ -1.2
CDK5RAP3-204ENST00000577664 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
CDK5RAP3-204ENST00000577664 A0A096LNJ9 63 aa7.56□□□□□ -1.2
CDK5RAP3-204ENST00000577664 SMAGPQ0VAQ4 97 aa7.56□□□□□ -1.2
CDK5RAP3-204ENST00000577664 Q9H8V8 135 aa7.56□□□□□ -1.2
CDK5RAP3-204ENST00000577664 IGIPA6NJ69 53 aa7.55□□□□□ -1.2
CDK5RAP3-204ENST00000577664 SIVA1O15304 175 aa7.55□□□□□ -1.2
CDK5RAP3-204ENST00000577664 NUPR1O60356 82 aa7.55□□□□□ -1.2
CDK5RAP3-204ENST00000577664 SERF1AO75920 110 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms