RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 TRIAP1O43715 76 aa12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 LINC01620Q4KN68 170 aa12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 Q6ZSN1 163 aa12.56□□□□□ -0.4
TOM1L1-221ENST00000575882 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 VPREB3Q9UKI3 123 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 A8MZ25 164 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 H3BMM0 161 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 SLURP1P55000 103 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 MAPK1IP1LQ8NDC0 245 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
TOM1L1-221ENST00000575882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 DSCR9P59020 149 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
TOM1L1-221ENST00000575882 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
TOM1L1-221ENST00000575882 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
TOM1L1-221ENST00000575882 A8MTW9 85 aa12.52□□□□□ -0.4
TOM1L1-221ENST00000575882 NPC2P61916 151 aa12.52□□□□□ -0.4
TOM1L1-221ENST00000575882 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
TOM1L1-221ENST00000575882 MIAQ16674 131 aa12.52□□□□□ -0.41
TOM1L1-221ENST00000575882 LINC00467Q9BRT7 94 aa12.52□□□□□ -0.41
TOM1L1-221ENST00000575882 IGHV3-38A0A0C4DH36 116 aa12.51□□□□□ -0.41
TOM1L1-221ENST00000575882 J3QLI3 93 aa12.51□□□□□ -0.41
TOM1L1-221ENST00000575882 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
TOM1L1-221ENST00000575882 TRBV10-2A0A0K0K1G8 114 aa12.5□□□□□ -0.41
TOM1L1-221ENST00000575882 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
TOM1L1-221ENST00000575882 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
TOM1L1-221ENST00000575882 A0A096LNT2 108 aa12.5□□□□□ -0.41
TOM1L1-221ENST00000575882 Q6ZSV7 163 aa12.5□□□□□ -0.41
TOM1L1-221ENST00000575882 Q6YL49 198 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 LINC01587Q99440 93 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
TOM1L1-221ENST00000575882 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
TOM1L1-221ENST00000575882 C11orf72Q8NBR9 251 aa12.48□□□□□ -0.41
TOM1L1-221ENST00000575882 LINC01600Q96MT4 127 aa12.48□□□□□ -0.41
TOM1L1-221ENST00000575882 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-221ENST00000575882 DOPEY1Q5JWR5 2465 aa12.47□□□□□ -0.41
TOM1L1-221ENST00000575882 CITED1Q99966 193 aa12.47□□□□□ -0.41
TOM1L1-221ENST00000575882 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
TOM1L1-221ENST00000575882 CDKN2A-AS1Q9UH64 79 aa12.47□□□□□ -0.41
TOM1L1-221ENST00000575882 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 COX6CP09669 75 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 TEX29Q8N6K0 151 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 DNAJC30Q96LL9 226 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.41
TOM1L1-221ENST00000575882 CSMD2Q7Z408 3487 aa12.46□□□□□ -0.42
TOM1L1-221ENST00000575882 C2orf82Q6UX34 121 aa12.46□□□□□ -0.42
TOM1L1-221ENST00000575882 DAND5Q8N907 189 aa12.46□□□□□ -0.42
TOM1L1-221ENST00000575882 CLEC2BQ92478 149 aa12.45□□□□□ -0.42
TOM1L1-221ENST00000575882 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
TOM1L1-221ENST00000575882 RNF183Q96D59 192 aa12.45□□□□□ -0.42
TOM1L1-221ENST00000575882 PEMTQ9UBM1 199 aa12.45□□□□□ -0.42
TOM1L1-221ENST00000575882 H7C423 109 aa12.45□□□□□ -0.42
TOM1L1-221ENST00000575882 FLNCQ14315 2725 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 TIMM17BO60830 172 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 BEAN1Q3B7T3 259 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 ANAPC13Q9BS18 74 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 FSHBP01225 129 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
TOM1L1-221ENST00000575882 USP9XQ93008 2570 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 RS1O15537 224 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 SNCGO76070 127 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 INSP01308 110 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 DGAT2L7PQ6IED9 249 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 TMEM101Q96IK0 257 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 NDUFA1O15239 70 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 IFITM1P13164 125 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 TIRAPP58753 221 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
TOM1L1-221ENST00000575882 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
TOM1L1-221ENST00000575882 CRLF1O75462 422 aa12.42□□□□□ -0.42
TOM1L1-221ENST00000575882 COX6A2Q02221 97 aa12.42□□□□□ -0.42
TOM1L1-221ENST00000575882 ZANQ9Y493 2812 aa12.42□□□□□ -0.42
TOM1L1-221ENST00000575882 UTP20O75691 2785 aaKnown RBP12.41□□□□□ -0.42
TOM1L1-221ENST00000575882 USP9YO00507 2555 aaPredicted RBP12.41□□□□□ -0.42
TOM1L1-221ENST00000575882 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
TOM1L1-221ENST00000575882 H3BT86 120 aa12.41□□□□□ -0.42
TOM1L1-221ENST00000575882 LST1O00453 97 aa12.41□□□□□ -0.42
TOM1L1-221ENST00000575882 IGHV3OR16-12A0A075B7B8 117 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 GAGE2BQ13066 116 aa12.4□□□□□ -0.42
TOM1L1-221ENST00000575882 GAGE2EQ4V326 116 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms