RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 CARD19Q96LW7 228 aa6.93□□□□□ -1.3
CHMP6-202ENST00000571457 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 DIRC1Q969H9 104 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 MARVELD1Q9BSK0 173 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 NIT2Q9NQR4 276 aa6.92□□□□□ -1.3
CHMP6-202ENST00000571457 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
CHMP6-202ENST00000571457 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
CHMP6-202ENST00000571457 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
CHMP6-202ENST00000571457 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
CHMP6-202ENST00000571457 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 FOXI1Q12951 378 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 C1orf137Q5JT78 98 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 AKR1C8PQ5T2L2 129 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 LINC00299Q6ZSB3 139 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 BAGE2Q86Y30 109 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 S100ZQ8WXG8 99 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 MLST8Q9BVC4 326 aa6.9□□□□□ -1.3
CHMP6-202ENST00000571457 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
CHMP6-202ENST00000571457 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
CHMP6-202ENST00000571457 H7C423 109 aa6.88□□□□□ -1.31
CHMP6-202ENST00000571457 UPK1BO75841 260 aa6.88□□□□□ -1.31
CHMP6-202ENST00000571457 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
CHMP6-202ENST00000571457 XCL1P47992 114 aa6.88□□□□□ -1.31
CHMP6-202ENST00000571457 RPL7L1Q6DKI1 246 aaKnown RBP6.88□□□□□ -1.31
CHMP6-202ENST00000571457 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
CHMP6-202ENST00000571457 TRAV1-1A0A0B4J248 108 aa6.87□□□□□ -1.31
CHMP6-202ENST00000571457 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
CHMP6-202ENST00000571457 FGF6P10767 208 aa6.87□□□□□ -1.31
CHMP6-202ENST00000571457 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
CHMP6-202ENST00000571457 NDUFA13Q9P0J0 144 aa6.87□□□□□ -1.31
CHMP6-202ENST00000571457 F2Z2F3 143 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 H0Y9J4 135 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 PAGE4O60829 102 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 NCR2O95944 276 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 IGLV7-43P04211 117 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 ZNF25P17030 456 aaPredicted RBP6.86□□□□□ -1.31
CHMP6-202ENST00000571457 NTF3P20783 257 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
CHMP6-202ENST00000571457 CAMPP49913 170 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 RPS20P60866 119 aaKnown RBP6.86□□□□□ -1.31
CHMP6-202ENST00000571457 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
CHMP6-202ENST00000571457 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
CHMP6-202ENST00000571457 CCL25O15444 150 aa6.85□□□□□ -1.31
CHMP6-202ENST00000571457 PFDN1O60925 122 aa6.85□□□□□ -1.31
CHMP6-202ENST00000571457 UBE2D1P51668 147 aa6.85□□□□□ -1.31
CHMP6-202ENST00000571457 EIF5AP63241 154 aaKnown RBP6.85□□□□□ -1.31
CHMP6-202ENST00000571457 TSKUQ8WUA8 353 aa6.85□□□□□ -1.31
CHMP6-202ENST00000571457 TMEM101Q96IK0 257 aa6.85□□□□□ -1.31
CHMP6-202ENST00000571457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
CHMP6-202ENST00000571457 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 SCO2A0A1W2PP80 73 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
CHMP6-202ENST00000571457 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 APOMO95445 188 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 APCSP02743 223 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 SS18Q15532 418 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 OR2D3Q8NGH3 330 aa6.84□□□□□ -1.31
CHMP6-202ENST00000571457 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
CHMP6-202ENST00000571457 BCL2P10415 239 aa6.83□□□□□ -1.32
CHMP6-202ENST00000571457 DEFA1P59665 94 aa6.83□□□□□ -1.32
CHMP6-202ENST00000571457 EIF5AL1Q6IS14 154 aaKnown RBP6.83□□□□□ -1.32
CHMP6-202ENST00000571457 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
CHMP6-202ENST00000571457 TMUB2Q71RG4 321 aa6.83□□□□□ -1.32
CHMP6-202ENST00000571457 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
CHMP6-202ENST00000571457 A0A087WZ39 114 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 MALP21145 153 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 IFITM3Q01628 133 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 RPL18AQ02543 176 aaKnown RBP6.82□□□□□ -1.32
CHMP6-202ENST00000571457 Q6ZNX1 250 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 NUP35Q8NFH5 326 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 CAMK2N2Q96S95 79 aa6.82□□□□□ -1.32
CHMP6-202ENST00000571457 IFNA1P01562 189 aa6.81□□□□□ -1.32
CHMP6-202ENST00000571457 RPL35P42766 123 aaKnown RBP6.81□□□□□ -1.32
CHMP6-202ENST00000571457 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
CHMP6-202ENST00000571457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
CHMP6-202ENST00000571457 KRTAP1-4P0C5Y4 121 aa6.8□□□□□ -1.32
CHMP6-202ENST00000571457 MEF2BQ02080 365 aaPredicted RBP6.8□□□□□ -1.32
CHMP6-202ENST00000571457 TEX261Q6UWH6 196 aa6.8□□□□□ -1.32
CHMP6-202ENST00000571457 LYZL1Q6UWQ5 148 aa6.8□□□□□ -1.32
CHMP6-202ENST00000571457 SFT2D1Q8WV19 159 aa6.8□□□□□ -1.32
CHMP6-202ENST00000571457 C2orf48Q96LS8 159 aa6.8□□□□□ -1.32
CHMP6-202ENST00000571457 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 COX7A2LO14548 114 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 RNF151Q2KHN1 245 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 Q5BKY6 102 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 C9orf62Q8N4C0 152 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 FAM210AQ96ND0 272 aa6.79□□□□□ -1.32
CHMP6-202ENST00000571457 CARHSP1Q9Y2V2 147 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms