RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-217	ENST00000569764	FAM231A	P0DMU4	169 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	FAM231C	P0DMU5	169 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	MFAP2	P55001	183 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	UBE2L3	P68036	154 aa	Known RBP	4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	ARL17A	Q8IVW1	177 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764		H0Y9J4	135 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	CGB3	P0DN86	165 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	CGB7	P0DN87	165 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	BLCAP	P62952	87 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	PRB3	Q04118	309 aa	Predicted RBP	4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	ZNF702P	Q9H963	129 aa		4.98	□□□□□ -1.61
SMG1-217	ENST00000569764	INS	P01308	110 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	C17orf58	Q2M2W7	97 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	AMTN	Q6UX39	209 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	GPHB5	Q86YW7	130 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764		Q8N7P7	452 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	WFDC9	Q8NEX5	89 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	TRAV10	A0A0B4J240	114 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	PGP	A6NDG6	321 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	ADARB2-AS1	A8MUL3	147 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	SSSCA1	O60232	199 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	FSHB	P01225	129 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	ICAM4	Q14773	271 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	C11orf72	Q8NBR9	251 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	SCRT1	Q9BWW7	348 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764		Q9H3A6	140 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	IGHV3OR16-12	A0A075B7B8	117 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764		M0R2P5	195 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	IGKC	P01834	107 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764		P0C879	139 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	CRYGA	P11844	174 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	RPL39P5	Q59GN2	51 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	NPCDR1	Q9BY65	106 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	TMEM14B	Q9NUH8	114 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	NHP2	Q9NX24	153 aa	Known RBP	4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	IGHV1-58	A0A0C4DH39	117 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	FCER1G	P30273	86 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	LGALS9C	Q6DKI2	356 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	ZNF833P	Q6ZTB9	187 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	TEN1	Q86WV5	123 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	SERP1	Q9Y6X1	66 aa		4.97	□□□□□ -1.61
SMG1-217	ENST00000569764	MXRA5	Q9NR99	2828 aa		4.96	□□□□□ -1.61
SMG1-217	ENST00000569764	UNC79	Q9P2D8	2635 aa		4.96	□□□□□ -1.61
SMG1-217	ENST00000569764	IGLV1-47	P01700	117 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	MED14OS	P0DP75	135 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	PSMB8	P28062	276 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	SEC61B	P60468	96 aa	Known RBP	4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	EBI3	Q14213	229 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	SPINK9	Q5DT21	86 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	NFE4	Q86UQ8	179 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	MGST2	Q99735	147 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	UBR5	O95071	2799 aa	Predicted RBP	4.96	□□□□□ -1.62
SMG1-217	ENST00000569764		M0R378	163 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	NCR2	O95944	276 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	HCP5	Q6MZN7	132 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	CYP2G1P	Q6ZSU1	146 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	LINC00479	Q96M42	142 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	TRGV2	A0A075B6R0	118 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	TRAV3	A0A0B4J244	114 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	CEND1	Q8N111	149 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764		Q8N2B8	174 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	C6orf223	Q8N319	242 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	NUP35	Q8NFH5	326 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	MPLKIP	Q8TAP9	179 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	TM2D3	Q9BRN9	247 aa		4.96	□□□□□ -1.62
SMG1-217	ENST00000569764	CCL20	P78556	96 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	FAM218A	Q96MZ4	157 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	SAA1	P0DJI8	122 aa	Predicted RBP	4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	IAPP	P10997	89 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	ZNF80	P51504	273 aa	Predicted RBP	4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	TMEM252	Q8N6L7	170 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	RHPN1-AS1	Q9BWJ2	59 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	CELA1	Q9UNI1	258 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	LY6G6C	O95867	125 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	MIF	P14174	115 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	ZNF137P	P52743	207 aa		4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	RPL23	P62829	140 aa	Known RBP	4.95	□□□□□ -1.62
SMG1-217	ENST00000569764	COX8A	P10176	69 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	NKAPP1	Q8N9T2	125 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764		Q8N9W7	124 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	TXNDC17	Q9BRA2	123 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	LINC00313	P59037	77 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	ZNF56	Q15929	161 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	SPANXN5	Q5MJ07	72 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	KRTAP1-3	Q8IUG1	177 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	PSENEN	Q9NZ42	101 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764		A0A0J9YXV3	536 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	IL4	P05112	153 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	RNASE2	P10153	161 aa	Known RBP	4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	SOSTDC1	Q6X4U4	206 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764		Q8N976	141 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	IZUMO1R	A6ND01	250 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	IGLL5	B9A064	214 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	FUS	P35637	526 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	TMEM61	Q8N0U2	210 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	GTSF1	Q8WW33	167 aa		4.94	□□□□□ -1.62
SMG1-217	ENST00000569764	LCA10	Q71F78	164 aa		4.93	□□□□□ -1.62
SMG1-217	ENST00000569764	SLC25A22	Q9H936	323 aa		4.93	□□□□□ -1.62
SMG1-217	ENST00000569764	LEPROTL1	O95214	131 aa		4.93	□□□□□ -1.62
SMG1-217	ENST00000569764	RIG	Q13278	110 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms