RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 H7C1H1 209 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 RAB4BP61018 213 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 ELOBQ15370 118 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 RMI2Q96E14 147 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 GNB1LQ9BYB4 327 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 URGCP-MRPS24S4R325 110 aa8.72□□□□□ -1.01
SPG7-221ENST00000569720 LINC00694P0DN24 101 aa8.71□□□□□ -1.02
SPG7-221ENST00000569720 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.02
SPG7-221ENST00000569720 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.02
SPG7-221ENST00000569720 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.02
SPG7-221ENST00000569720 HLA-DQA1P01909 254 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 PPBPP02775 128 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 Q8N3U1 123 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 JPT2Q9H910 190 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
SPG7-221ENST00000569720 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 LECT2O14960 151 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
SPG7-221ENST00000569720 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 UFSP1Q6NVU6 142 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 C14orf178Q8N769 122 aaPredicted RBP8.69□□□□□ -1.02
SPG7-221ENST00000569720 MRAP2Q96G30 205 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 SAMD10Q9BYL1 202 aa8.69□□□□□ -1.02
SPG7-221ENST00000569720 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.68□□□□□ -1.02
SPG7-221ENST00000569720 WFDC2Q14508 124 aa8.68□□□□□ -1.02
SPG7-221ENST00000569720 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
SPG7-221ENST00000569720 DNAJC30Q96LL9 226 aa8.68□□□□□ -1.02
SPG7-221ENST00000569720 YPEL4Q96NS1 127 aa8.68□□□□□ -1.02
SPG7-221ENST00000569720 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
SPG7-221ENST00000569720 J3QL48 77 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 CAMPP49913 170 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 NIT1Q86X76 327 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 Q8N976 141 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 Q9UF83 564 aa8.67□□□□□ -1.02
SPG7-221ENST00000569720 IGKV2D-24A0A075B6R9 120 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 A0A087WWL8 130 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 A0A087WX48 190 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 MUC21A0A0G2JKD1 596 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 F5H697 171 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 PHOX2AO14813 284 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 RAB4AP20338 218 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 Q6ZSA8 131 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
SPG7-221ENST00000569720 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 KLK12Q9UKR0 248 aa8.66□□□□□ -1.02
SPG7-221ENST00000569720 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
SPG7-221ENST00000569720 TMEM136Q6ZRR5 245 aa8.65□□□□□ -1.02
SPG7-221ENST00000569720 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.02
SPG7-221ENST00000569720 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
SPG7-221ENST00000569720 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
SPG7-221ENST00000569720 COLCA2A8K830 154 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 APCSP02743 223 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 SSTP61278 116 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 ZNF56Q15929 161 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 UBE2WQ96B02 151 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 NIT2Q9NQR4 276 aa8.64□□□□□ -1.03
SPG7-221ENST00000569720 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 M0QY20 66 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 TCAPO15273 167 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 CKS2P33552 79 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 Q0VG73 95 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 ORMDL3Q8N138 153 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 C20orf78Q9BR46 151 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
SPG7-221ENST00000569720 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 MGPP08493 103 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 RAB5AP20339 215 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 UBE2D3P61077 147 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 UBE2D2P62837 147 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 RPL32P62910 135 aaKnown RBP8.62□□□□□ -1.03
SPG7-221ENST00000569720 MRPL51Q4U2R6 128 aaKnown RBP8.62□□□□□ -1.03
SPG7-221ENST00000569720 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
SPG7-221ENST00000569720 K7EMI3 77 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 CRPP02741 224 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
SPG7-221ENST00000569720 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
SPG7-221ENST00000569720 RPS10P46783 165 aaKnown RBP8.6□□□□□ -1.03
SPG7-221ENST00000569720 PKIAP61925 76 aa8.6□□□□□ -1.03
SPG7-221ENST00000569720 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
SPG7-221ENST00000569720 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
SPG7-221ENST00000569720 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
SPG7-221ENST00000569720 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
SPG7-221ENST00000569720 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
SPG7-221ENST00000569720 D6R8Y8 96 aa8.58□□□□□ -1.04
SPG7-221ENST00000569720 VCYO14598 125 aa8.58□□□□□ -1.04
SPG7-221ENST00000569720 SCO1O75880 301 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms