RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SRRM2Q9UQ35 2752 aaKnown RBP12.25□□□□□ -0.45
LINC01238-205ENST00000567549 Q9UF83 564 aa12.25□□□□□ -0.45
LINC01238-205ENST00000567549 A8MWL6 223 aa12.24□□□□□ -0.45
LINC01238-205ENST00000567549 F5H697 171 aa12.24□□□□□ -0.45
LINC01238-205ENST00000567549 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
LINC01238-205ENST00000567549 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
LINC01238-205ENST00000567549 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
LINC01238-205ENST00000567549 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 FAM231BA6NCW3 169 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 SNAI2O43623 268 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 ANGP03950 147 aaKnown RBP12.23□□□□□ -0.45
LINC01238-205ENST00000567549 MIAQ16674 131 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
LINC01238-205ENST00000567549 H7C1H1 209 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 TSKUQ8WUA8 353 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 HERC1Q15751 4861 aa12.22□□□□□ -0.45
LINC01238-205ENST00000567549 XKRY2A2RUG3 117 aa12.21□□□□□ -0.45
LINC01238-205ENST00000567549 C1orf196B1AJZ1 125 aa12.21□□□□□ -0.45
LINC01238-205ENST00000567549 RPS10P46783 165 aaKnown RBP12.21□□□□□ -0.45
LINC01238-205ENST00000567549 RPS20P60866 119 aaKnown RBP12.21□□□□□ -0.45
LINC01238-205ENST00000567549 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
LINC01238-205ENST00000567549 SSBP4Q9BWG4 385 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-205ENST00000567549 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.45
LINC01238-205ENST00000567549 FAT1Q14517 4588 aa12.21□□□□□ -0.46
LINC01238-205ENST00000567549 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
LINC01238-205ENST00000567549 COX19Q49B96 90 aa12.2□□□□□ -0.46
LINC01238-205ENST00000567549 SCXQ7RTU7 201 aa12.2□□□□□ -0.46
LINC01238-205ENST00000567549 NAT8BQ9UHF3 227 aa12.2□□□□□ -0.46
LINC01238-205ENST00000567549 OR2D3Q8NGH3 330 aa12.19□□□□□ -0.46
LINC01238-205ENST00000567549 KRTAP29-1A8MX34 341 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-205ENST00000567549 RAB5BP61020 215 aa12.18□□□□□ -0.46
LINC01238-205ENST00000567549 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
LINC01238-205ENST00000567549 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
LINC01238-205ENST00000567549 MPV17L2Q567V2 206 aa12.17□□□□□ -0.46
LINC01238-205ENST00000567549 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
LINC01238-205ENST00000567549 RASL11AQ6T310 242 aa12.17□□□□□ -0.46
LINC01238-205ENST00000567549 HLA-DQA1P01909 254 aa12.16□□□□□ -0.46
LINC01238-205ENST00000567549 CACNG7P62955 275 aa12.16□□□□□ -0.46
LINC01238-205ENST00000567549 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
LINC01238-205ENST00000567549 ENHOQ6UWT2 76 aa12.16□□□□□ -0.46
LINC01238-205ENST00000567549 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
LINC01238-205ENST00000567549 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
LINC01238-205ENST00000567549 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
LINC01238-205ENST00000567549 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
LINC01238-205ENST00000567549 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
LINC01238-205ENST00000567549 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
LINC01238-205ENST00000567549 F2Z2F3 143 aa12.14□□□□□ -0.47
LINC01238-205ENST00000567549 FER1L6-AS1Q8NA97 138 aa12.14□□□□□ -0.47
LINC01238-205ENST00000567549 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
LINC01238-205ENST00000567549 MYCBP2O75592 4640 aa12.14□□□□□ -0.47
LINC01238-205ENST00000567549 MT-ND6P03923 174 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 TPPP3Q9BW30 176 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 PRR34Q9NV39 138 aa12.13□□□□□ -0.47
LINC01238-205ENST00000567549 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 TRGC2P03986 189 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 MGPP08493 103 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 SSTP61278 116 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
LINC01238-205ENST00000567549 MUC21A0A0G2JKD1 596 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 MUC21A0A140T8X8 626 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 A0A1B0GW15 77 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 OXTP01178 125 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 S100A8P05109 93 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 RBX1P62877 108 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 RIGQ13278 110 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 SERTAD4-AS1Q5TG53 156 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
LINC01238-205ENST00000567549 GZMBP10144 247 aa12.1□□□□□ -0.47
LINC01238-205ENST00000567549 GAGE6Q13070 117 aa12.1□□□□□ -0.47
LINC01238-205ENST00000567549 LINC00269Q8N2A0 174 aa12.1□□□□□ -0.47
LINC01238-205ENST00000567549 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
LINC01238-205ENST00000567549 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-205ENST00000567549 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
LINC01238-205ENST00000567549 MRPL54Q6P161 138 aaKnown RBP12.09□□□□□ -0.47
LINC01238-205ENST00000567549 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
LINC01238-205ENST00000567549 M0QY20 66 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 UBE2L6O14933 153 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 HBBP68871 147 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 REG3AQ06141 175 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 TMEM243Q9BU79 118 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
LINC01238-205ENST00000567549 A0A1B0GUV1 79 aa12.07□□□□□ -0.48
LINC01238-205ENST00000567549 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
LINC01238-205ENST00000567549 PHOX2AO14813 284 aa12.07□□□□□ -0.48
LINC01238-205ENST00000567549 S100A6P06703 90 aa12.07□□□□□ -0.48
LINC01238-205ENST00000567549 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms