RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 ABCA12Q86UK0 2595 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
CDH1-209ENST00000566510 NPC2P61916 151 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
CDH1-209ENST00000566510 ELANEP08246 267 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 DSCR9P59020 149 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 FHL3Q13643 280 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 HIST2H2BDQ6DRA6 164 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 TMEM263Q8WUH6 116 aaKnown RBP10.42□□□□□ -0.74
CDH1-209ENST00000566510 ZFYVE26Q68DK2 2539 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 PTPN13Q12923 2485 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
CDH1-209ENST00000566510 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
CDH1-209ENST00000566510 A0A1B0GV72 72 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
CDH1-209ENST00000566510 A8MZ25 164 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 SLC25A20O43772 301 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 Q6ZSN1 163 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 CIDEAO60543 219 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 CKS1BP61024 79 aa10.41□□□□□ -0.74
CDH1-209ENST00000566510 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.4□□□□□ -0.74
CDH1-209ENST00000566510 H3BMM0 161 aa10.4□□□□□ -0.74
CDH1-209ENST00000566510 M0R2P5 195 aa10.4□□□□□ -0.74
CDH1-209ENST00000566510 LINC01587Q99440 93 aa10.4□□□□□ -0.74
CDH1-209ENST00000566510 CHD6Q8TD26 2715 aa10.4□□□□□ -0.74
CDH1-209ENST00000566510 FBN2P35556 2912 aa10.4□□□□□ -0.74
CDH1-209ENST00000566510 A0A0B4J2C4 111 aa10.4□□□□□ -0.75
CDH1-209ENST00000566510 PYGO1Q9Y3Y4 419 aa10.4□□□□□ -0.75
CDH1-209ENST00000566510 RBMY1BA6NDE4 496 aaKnown RBP10.39□□□□□ -0.75
CDH1-209ENST00000566510 RBMY1EA6NEQ0 496 aaKnown RBP10.39□□□□□ -0.75
CDH1-209ENST00000566510 RBMY1DP0C7P1 496 aaKnown RBP10.39□□□□□ -0.75
CDH1-209ENST00000566510 XGP55808 180 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 MRPS36P82909 103 aaKnown RBP10.39□□□□□ -0.75
CDH1-209ENST00000566510 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 FAM104AQ969W3 186 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 NDUFA12Q9UI09 145 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 NAV2Q8IVL1 2488 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 Q6ZUT4 128 aa10.39□□□□□ -0.75
CDH1-209ENST00000566510 CRYBA4P53673 196 aa10.38□□□□□ -0.75
CDH1-209ENST00000566510 ZNF415Q09FC8 603 aa10.38□□□□□ -0.75
CDH1-209ENST00000566510 J3QLI3 93 aa10.38□□□□□ -0.75
CDH1-209ENST00000566510 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CDH1-209ENST00000566510 Q6YL49 198 aa10.38□□□□□ -0.75
CDH1-209ENST00000566510 GEMIN7Q9H840 131 aaKnown RBP10.38□□□□□ -0.75
CDH1-209ENST00000566510 SONP18583 2426 aaKnown RBP10.37□□□□□ -0.75
CDH1-209ENST00000566510 SETD2Q9BYW2 2564 aaPredicted RBP10.37□□□□□ -0.75
CDH1-209ENST00000566510 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 C2CD3Q4AC94 2353 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
CDH1-209ENST00000566510 EPG5Q9HCE0 2579 aa10.36□□□□□ -0.75
CDH1-209ENST00000566510 ATXN8Q156A1 80 aa10.36□□□□□ -0.75
CDH1-209ENST00000566510 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
CDH1-209ENST00000566510 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
CDH1-209ENST00000566510 ZNF462Q96JM2 2506 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 TRIAP1O43715 76 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 Q6ZSV7 163 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 VSIG2Q96IQ7 327 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 DAND5Q8N907 189 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 LITAFQ99732 161 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
CDH1-209ENST00000566510 A0A096LNT2 108 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 Q5PR19 223 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
CDH1-209ENST00000566510 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 SPANXA1Q9NS26 97 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 XCL2Q9UBD3 114 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 NF1P21359 2839 aa10.34□□□□□ -0.75
CDH1-209ENST00000566510 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
CDH1-209ENST00000566510 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
CDH1-209ENST00000566510 IGHV4-31P0DP07 118 aa10.32□□□□□ -0.76
CDH1-209ENST00000566510 MIAQ16674 131 aa10.32□□□□□ -0.76
CDH1-209ENST00000566510 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
CDH1-209ENST00000566510 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 TEX49A0A1B0GTD5 131 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 INSP01308 110 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 CR1P17927 2039 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 C11orf44Q8N8P7 122 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 C11orf72Q8NBR9 251 aa10.31□□□□□ -0.76
CDH1-209ENST00000566510 PRB1P04280 392 aa10.3□□□□□ -0.76
CDH1-209ENST00000566510 COX6CP09669 75 aa10.3□□□□□ -0.76
CDH1-209ENST00000566510 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
CDH1-209ENST00000566510 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
CDH1-209ENST00000566510 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
CDH1-209ENST00000566510 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms