RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 UBE2D2P62837 147 aa13.15□□□□□ -0.3
COMMD4-213ENST00000565834 CTAG1AP78358 180 aa13.15□□□□□ -0.3
COMMD4-213ENST00000565834 ORMDL2Q53FV1 153 aa13.15□□□□□ -0.3
COMMD4-213ENST00000565834 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-213ENST00000565834 GYPEP15421 78 aa13.15□□□□□ -0.31
COMMD4-213ENST00000565834 DEFB104AQ8WTQ1 72 aa13.15□□□□□ -0.31
COMMD4-213ENST00000565834 TRAV26-1A0A087WT03 109 aa13.14□□□□□ -0.31
COMMD4-213ENST00000565834 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
COMMD4-213ENST00000565834 A0A0J9YY99 117 aa13.14□□□□□ -0.31
COMMD4-213ENST00000565834 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-213ENST00000565834 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
COMMD4-213ENST00000565834 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
COMMD4-213ENST00000565834 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
COMMD4-213ENST00000565834 PRKDCP78527 4128 aaKnown RBP13.14□□□□□ -0.31
COMMD4-213ENST00000565834 STAB2Q8WWQ8 2551 aa13.13□□□□□ -0.31
COMMD4-213ENST00000565834 TSHBP01222 138 aa13.13□□□□□ -0.31
COMMD4-213ENST00000565834 NUDT3O95989 172 aa13.12□□□□□ -0.31
COMMD4-213ENST00000565834 HBDP02042 147 aa13.12□□□□□ -0.31
COMMD4-213ENST00000565834 LINC00694P0DN24 101 aa13.12□□□□□ -0.31
COMMD4-213ENST00000565834 A0A096LNJ9 63 aa13.12□□□□□ -0.31
COMMD4-213ENST00000565834 COTL1Q14019 142 aa13.12□□□□□ -0.31
COMMD4-213ENST00000565834 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
COMMD4-213ENST00000565834 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
COMMD4-213ENST00000565834 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
COMMD4-213ENST00000565834 LEPROTL1O95214 131 aa13.09□□□□□ -0.31
COMMD4-213ENST00000565834 TRAV10A0A0B4J240 114 aa13.08□□□□□ -0.31
COMMD4-213ENST00000565834 G0S2P27469 103 aa13.08□□□□□ -0.31
COMMD4-213ENST00000565834 PKIAP61925 76 aa13.08□□□□□ -0.31
COMMD4-213ENST00000565834 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
COMMD4-213ENST00000565834 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
COMMD4-213ENST00000565834 H3BNG1 76 aa13.07□□□□□ -0.32
COMMD4-213ENST00000565834 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
COMMD4-213ENST00000565834 C2orf66Q6UXQ4 117 aa13.07□□□□□ -0.32
COMMD4-213ENST00000565834 CYSLTR1Q9Y271 337 aa13.07□□□□□ -0.32
COMMD4-213ENST00000565834 LINC00587B1AMM8 73 aa13.06□□□□□ -0.32
COMMD4-213ENST00000565834 TOMM6Q96B49 74 aa13.06□□□□□ -0.32
COMMD4-213ENST00000565834 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
COMMD4-213ENST00000565834 C20orf203Q8NBC4 194 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 A0A096LPF7 62 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 TMEM97Q5BJF2 176 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 NTM-AS1Q6ZSK4 140 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 LINC00173Q6ZV60 143 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
COMMD4-213ENST00000565834 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
COMMD4-213ENST00000565834 SCGB3A1Q96QR1 104 aa13.02□□□□□ -0.32
COMMD4-213ENST00000565834 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.33
COMMD4-213ENST00000565834 TRBV6-8A0A0A6YYG3 113 aa13.02□□□□□ -0.33
COMMD4-213ENST00000565834 ATP5LO75964 103 aa13.02□□□□□ -0.33
COMMD4-213ENST00000565834 KRTDAPP60985 99 aa13.02□□□□□ -0.33
COMMD4-213ENST00000565834 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-213ENST00000565834 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-213ENST00000565834 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
COMMD4-213ENST00000565834 TMEM243Q9BU79 118 aa13.01□□□□□ -0.33
COMMD4-213ENST00000565834 C3orf79P0CE67 100 aa13□□□□□ -0.33
COMMD4-213ENST00000565834 ERASQ7Z444 233 aa13□□□□□ -0.33
COMMD4-213ENST00000565834 MAP1LC3CQ9BXW4 147 aa13□□□□□ -0.33
COMMD4-213ENST00000565834 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-213ENST00000565834 UBE2L6O14933 153 aa12.98□□□□□ -0.33
COMMD4-213ENST00000565834 TIMM17AQ99595 171 aa12.98□□□□□ -0.33
COMMD4-213ENST00000565834 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
COMMD4-213ENST00000565834 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
COMMD4-213ENST00000565834 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
COMMD4-213ENST00000565834 H0Y8G0 127 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 DDTP30046 118 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 Q6ZN92 141 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 CHCHD5Q9BSY4 110 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 SPANXA1Q9NS26 97 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 UBE2D4Q9Y2X8 147 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
COMMD4-213ENST00000565834 H7C423 109 aa12.96□□□□□ -0.34
COMMD4-213ENST00000565834 SMAGPQ0VAQ4 97 aa12.96□□□□□ -0.34
COMMD4-213ENST00000565834 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.34
COMMD4-213ENST00000565834 IGLL5B9A064 214 aa12.95□□□□□ -0.34
COMMD4-213ENST00000565834 SCGB1D1O95968 90 aa12.95□□□□□ -0.34
COMMD4-213ENST00000565834 PRSS1P07477 247 aa12.95□□□□□ -0.34
COMMD4-213ENST00000565834 CDPF1Q6NVV7 123 aa12.95□□□□□ -0.34
COMMD4-213ENST00000565834 TIMM21Q9BVV7 248 aa12.95□□□□□ -0.34
COMMD4-213ENST00000565834 FGF6P10767 208 aa12.94□□□□□ -0.34
COMMD4-213ENST00000565834 TIRAPP58753 221 aa12.94□□□□□ -0.34
COMMD4-213ENST00000565834 GAGE6Q13070 117 aa12.94□□□□□ -0.34
COMMD4-213ENST00000565834 CEMP1Q6PRD7 247 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-213ENST00000565834 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
COMMD4-213ENST00000565834 PET117Q6UWS5 81 aa12.94□□□□□ -0.34
COMMD4-213ENST00000565834 LELP1Q5T871 98 aa12.93□□□□□ -0.34
COMMD4-213ENST00000565834 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
COMMD4-213ENST00000565834 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
COMMD4-213ENST00000565834 MRPL52Q86TS9 123 aaKnown RBP12.93□□□□□ -0.34
COMMD4-213ENST00000565834 DGAT2L7PQ6IED9 249 aa12.93□□□□□ -0.34
COMMD4-213ENST00000565834 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
COMMD4-213ENST00000565834 OPRPNQ99935 248 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-213ENST00000565834 IGLV4-3A0A075B6K6 122 aa12.92□□□□□ -0.34
COMMD4-213ENST00000565834 NPSP0C0P6 89 aa12.92□□□□□ -0.34
COMMD4-213ENST00000565834 PAPPA-AS1Q5QFB9 102 aa12.92□□□□□ -0.34
COMMD4-213ENST00000565834 C20orf202A1L168 122 aa12.91□□□□□ -0.34
COMMD4-213ENST00000565834 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
COMMD4-213ENST00000565834 CSDC2Q9Y534 153 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms