RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SPATA45Q537H7 98 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 SLC25A29Q8N8R3 303 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
CHD9-217ENST00000565832 ZMAT5Q9UDW3 170 aaKnown RBP4.42□□□□□ -1.7
CHD9-217ENST00000565832 TRBV6-5A0A0K0K1A5 114 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 PPP1R17O96001 155 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TSHBP01222 138 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 DDTP30046 118 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 CEMP1Q6PRD7 247 aaPredicted RBP4.41□□□□□ -1.7
CHD9-217ENST00000565832 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 OR11H2Q8NH07 326 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 ZNRF2Q8NHG8 242 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TOMM6Q96B49 74 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 SCGB3A1Q96QR1 104 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TRAV9-2A0A087WT02 112 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TSTD3H0UI37 97 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 PTH2Q96A98 100 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 OVOL2Q9BRP0 275 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 RETNQ9HD89 108 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 TP53TG1Q9Y2A0 90 aa4.41□□□□□ -1.7
CHD9-217ENST00000565832 GAGE12HA6NDE8 117 aa4.4□□□□□ -1.7
CHD9-217ENST00000565832 I3L3M4 83 aa4.4□□□□□ -1.7
CHD9-217ENST00000565832 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.7
CHD9-217ENST00000565832 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.7
CHD9-217ENST00000565832 KIR2DL5BA0A0G2JN68 375 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 KIR2DL5BA0A0G2JPC4 375 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 IGIPA6NJ69 53 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.71
CHD9-217ENST00000565832 GAGE1Q13065 139 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 GAGE4Q13068 117 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 GAGE5Q13069 117 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 KIR2DL5AQ8N109 375 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 HHLA3Q9XRX5 114 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 TENM2Q9NT68 2774 aa4.4□□□□□ -1.71
CHD9-217ENST00000565832 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.39□□□□□ -1.71
CHD9-217ENST00000565832 TRAV4A0A0B4J268 109 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 IGHV4-28A0A0C4DH34 117 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
CHD9-217ENST00000565832 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
CHD9-217ENST00000565832 H7C1H1 209 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 APOC4P55056 127 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
CHD9-217ENST00000565832 EGFEM1PQ0D2K5 195 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 FHL2Q14192 279 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 RNASE13Q5GAN3 156 aaKnown RBP4.39□□□□□ -1.71
CHD9-217ENST00000565832 ERASQ7Z444 233 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
CHD9-217ENST00000565832 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 TRGV4A0A0C4DH28 118 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 C20orf202A1L168 122 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 RHODO00212 210 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 ATP5LO75964 103 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 LGALS9CQ6DKI2 356 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 Q6ZN92 141 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 NTM-AS1Q6ZSK4 140 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 KIR2DL5BQ8NHK3 375 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 DNHD1Q96M86 4753 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 LYSTQ99698 3801 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 IGKV2D-26A0A0A0MRZ7 120 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 K7EMI3 77 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 Q8NAQ8 132 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 MIEN1Q9BRT3 115 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 EDA2RQ9HAV5 297 aa4.38□□□□□ -1.71
CHD9-217ENST00000565832 CSMD3Q7Z407 3707 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 A0A087WX48 190 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 A0A096LPF7 62 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 K7EQD1 137 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 LINC00694P0DN24 101 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 TIRAPP58753 221 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 RNF183Q96D59 192 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 A0A0J9YY99 117 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 SMIM9A6NGZ8 99 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 IGKCP01834 107 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 CTAG1AP78358 180 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 NDUFAF3Q9BU61 184 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 CST9LQ9H4G1 147 aa4.37□□□□□ -1.71
CHD9-217ENST00000565832 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
CHD9-217ENST00000565832 HSBP1L1C9JCN9 74 aa4.36□□□□□ -1.71
CHD9-217ENST00000565832 UBE2D3P61077 147 aa4.36□□□□□ -1.71
CHD9-217ENST00000565832 UBE2D2P62837 147 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms