RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SUMO4Q6EEV6 95 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 RASL11AQ6T310 242 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 SEC11CQ9BY50 192 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 NIT2Q9NQR4 276 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 HLA-DQA1P01909 254 aa7.9□□□□□ -1.14
GTF3C1-204ENST00000564664 MGPP08493 103 aa7.9□□□□□ -1.14
GTF3C1-204ENST00000564664 BCL2P10415 239 aa7.9□□□□□ -1.14
GTF3C1-204ENST00000564664 NTF3P20783 257 aa7.9□□□□□ -1.14
GTF3C1-204ENST00000564664 C9orf163Q8N9P6 203 aa7.9□□□□□ -1.14
GTF3C1-204ENST00000564664 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 OXTP01178 125 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 PRSS1P07477 247 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 REG3AQ06141 175 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 KRTAP26-1Q6PEX3 210 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 LYZL1Q6UWQ5 148 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 SVBPQ8N300 66 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 CNFNQ9BYD5 112 aa7.89□□□□□ -1.15
GTF3C1-204ENST00000564664 NUDT10Q8NFP7 164 aa7.88□□□□□ -1.15
GTF3C1-204ENST00000564664 NUDT11Q96G61 164 aa7.88□□□□□ -1.15
GTF3C1-204ENST00000564664 TRBV20OR9-2A0A075B6H5 130 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 UBE2L6O14933 153 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 CTRLP40313 264 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 COTL1Q14019 142 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 TWIST1Q15672 202 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 C20orf203Q8NBC4 194 aa7.87□□□□□ -1.15
GTF3C1-204ENST00000564664 SNAPINO95295 136 aa7.86□□□□□ -1.15
GTF3C1-204ENST00000564664 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
GTF3C1-204ENST00000564664 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
GTF3C1-204ENST00000564664 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 NCR2O95944 276 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 PEA15Q15121 130 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 CFAP161Q6P656 301 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 SMIM15Q7Z3B0 74 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 OCC1Q8TAD7 63 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 AP5S1Q9NUS5 200 aa7.85□□□□□ -1.15
GTF3C1-204ENST00000564664 IGLV4-60A0A075B6I1 120 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 TMEM250H0YL14 139 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 H7C423 109 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 APOC3P02656 99 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 AMTP48728 403 aa7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
GTF3C1-204ENST00000564664 IGLV10-54A0A075B6I4 117 aa7.83□□□□□ -1.16
GTF3C1-204ENST00000564664 IGHV3-64A0A075B6Q5 118 aa7.83□□□□□ -1.16
GTF3C1-204ENST00000564664 GATD1Q8NB37 220 aa7.83□□□□□ -1.16
GTF3C1-204ENST00000564664 RNF185Q96GF1 192 aa7.83□□□□□ -1.16
GTF3C1-204ENST00000564664 A8MWL6 223 aa7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 F8W036 122 aa7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 K7EN84 100 aa7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 CIRBPQ14011 172 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
GTF3C1-204ENST00000564664 LOC105371267A0A1B0GV96 52 aa7.81□□□□□ -1.16
GTF3C1-204ENST00000564664 ADCYAP1P18509 176 aa7.81□□□□□ -1.16
GTF3C1-204ENST00000564664 GATCO43716 136 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 SCO1O75880 301 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 CT83Q5H943 113 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 AMMECR1LQ6DCA0 310 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 DPH3Q96FX2 82 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-204ENST00000564664 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
GTF3C1-204ENST00000564664 I3L3M4 83 aa7.79□□□□□ -1.16
GTF3C1-204ENST00000564664 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-204ENST00000564664 BORCS7Q96B45 105 aa7.79□□□□□ -1.16
GTF3C1-204ENST00000564664 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 FAM231BA6NCW3 169 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 GAGE12HA6NDE8 117 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 APCSP02743 223 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 SLPIP03973 132 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 SRSF3P84103 164 aaKnown RBP7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 RHEBQ15382 184 aa7.78□□□□□ -1.16
GTF3C1-204ENST00000564664 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.16
GTF3C1-204ENST00000564664 PANO1I0J062 215 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 PMCHP20382 165 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 RPS10P46783 165 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 RNASEKQ6P5S7 137 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 Q6ZRU5 148 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 TMEM101Q96IK0 257 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 BTF3L4Q96K17 158 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 SMCO4Q9NRQ5 59 aa7.77□□□□□ -1.17
GTF3C1-204ENST00000564664 FGF6P10767 208 aa7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 SPACA4Q8TDM5 124 aa7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
GTF3C1-204ENST00000564664 A0A087WYN8 130 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
GTF3C1-204ENST00000564664 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms