RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
NME3-207ENST00000564628 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 TRAV8-6A0A0B4J262 113 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 PPBPP02775 128 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 UBE2D3P61077 147 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 UBE2D2P62837 147 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
NME3-207ENST00000564628 FAT1Q14517 4588 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 RAB4AP20338 218 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
NME3-207ENST00000564628 OR10J3Q5JRS4 329 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 Q5VSD8 79 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
NME3-207ENST00000564628 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
NME3-207ENST00000564628 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
NME3-207ENST00000564628 PHOX2AO14813 284 aa12.73□□□□□ -0.37
NME3-207ENST00000564628 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
NME3-207ENST00000564628 F5H697 171 aa12.72□□□□□ -0.37
NME3-207ENST00000564628 CKS2P33552 79 aa12.72□□□□□ -0.37
NME3-207ENST00000564628 FUSP35637 526 aaKnown RBP eCLIP12.72□□□□□ -0.37
NME3-207ENST00000564628 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
NME3-207ENST00000564628 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
NME3-207ENST00000564628 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
NME3-207ENST00000564628 A0A087WTM6 91 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 M0QY20 66 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 PPP1R17O96001 155 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 C10orf126Q8N4M7 172 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 RNF185Q96GF1 192 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
NME3-207ENST00000564628 MGPP08493 103 aa12.7□□□□□ -0.38
NME3-207ENST00000564628 KRTAP10-1P60331 282 aa12.7□□□□□ -0.38
NME3-207ENST00000564628 SUMO4Q6EEV6 95 aa12.7□□□□□ -0.38
NME3-207ENST00000564628 ALKBH7Q9BT30 221 aaPredicted RBP12.7□□□□□ -0.38
NME3-207ENST00000564628 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BKO60814 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BJP06899 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BOP23527 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BBP33778 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BDP58876 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BCP62807 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST2H2BEQ16778 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BHQ93079 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BNQ99877 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 HIST1H2BMQ99879 126 aa12.69□□□□□ -0.38
NME3-207ENST00000564628 D6R8Y8 96 aa12.68□□□□□ -0.38
NME3-207ENST00000564628 H7C1H1 209 aa12.68□□□□□ -0.38
NME3-207ENST00000564628 S100A6P06703 90 aa12.68□□□□□ -0.38
NME3-207ENST00000564628 PRELID3AQ96N28 172 aa12.68□□□□□ -0.38
NME3-207ENST00000564628 TMA7Q9Y2S6 64 aaKnown RBP12.68□□□□□ -0.38
NME3-207ENST00000564628 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
NME3-207ENST00000564628 Q0VG73 95 aa12.67□□□□□ -0.38
NME3-207ENST00000564628 Q8N3U1 123 aa12.67□□□□□ -0.38
NME3-207ENST00000564628 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
NME3-207ENST00000564628 DAZ4Q86SG3 579 aaKnown RBP12.66□□□□□ -0.38
NME3-207ENST00000564628 DAZ3Q9NR90 486 aaKnown RBP12.66□□□□□ -0.38
NME3-207ENST00000564628 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
NME3-207ENST00000564628 VPS13BQ7Z7G8 4022 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 TRBV6-8A0A0A6YYG3 113 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 GCSHP23434 173 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 NIT1Q86X76 327 aa12.65□□□□□ -0.38
NME3-207ENST00000564628 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
NME3-207ENST00000564628 NDUFA6P56556 154 aa12.64□□□□□ -0.39
NME3-207ENST00000564628 LAGE3Q14657 143 aa12.64□□□□□ -0.39
NME3-207ENST00000564628 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
NME3-207ENST00000564628 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
NME3-207ENST00000564628 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 TMEM97Q5BJF2 176 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 CHCHD7Q9BUK0 85 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 NIT2Q9NQR4 276 aa12.63□□□□□ -0.39
NME3-207ENST00000564628 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
NME3-207ENST00000564628 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
NME3-207ENST00000564628 NCR2O95944 276 aa12.62□□□□□ -0.39
NME3-207ENST00000564628 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
NME3-207ENST00000564628 PRSS47A8MTI9 375 aa12.61□□□□□ -0.39
NME3-207ENST00000564628 NPYP01303 97 aa12.61□□□□□ -0.39
NME3-207ENST00000564628 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
NME3-207ENST00000564628 COA6Q5JTJ3 125 aaKnown RBP12.61□□□□□ -0.39
NME3-207ENST00000564628 PRSS3P2Q8NHM4 247 aa12.61□□□□□ -0.39
NME3-207ENST00000564628 NRACQ8N912 160 aa12.6□□□□□ -0.39
NME3-207ENST00000564628 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
NME3-207ENST00000564628 ST20Q9HBF5 79 aa12.6□□□□□ -0.39
NME3-207ENST00000564628 FLG2Q5D862 2391 aaPredicted RBP12.59□□□□□ -0.39
NME3-207ENST00000564628 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
NME3-207ENST00000564628 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
NME3-207ENST00000564628 TRBV6-5A0A0K0K1A5 114 aa12.58□□□□□ -0.4
NME3-207ENST00000564628 LINC00614P0C842 121 aa12.58□□□□□ -0.4
NME3-207ENST00000564628 PMCHP20382 165 aa12.58□□□□□ -0.4
NME3-207ENST00000564628 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
NME3-207ENST00000564628 NTN5Q8WTR8 489 aaPredicted RBP12.58□□□□□ -0.4
NME3-207ENST00000564628 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms