RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 S100A2P29034 98 aa8.95□□□□□ -0.98
CLK3-214ENST00000564096 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
CLK3-214ENST00000564096 PRKDCP78527 4128 aaKnown RBP8.94□□□□□ -0.98
CLK3-214ENST00000564096 TSHBP01222 138 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 HBDP02042 147 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 ESDP10768 282 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 AMTP48728 403 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 SMAGPQ0VAQ4 97 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 Q9UF83 564 aa8.94□□□□□ -0.98
CLK3-214ENST00000564096 KLK5Q9Y337 293 aaPredicted RBP8.94□□□□□ -0.98
CLK3-214ENST00000564096 TRBV25-1A0A075B6N4 114 aa8.93□□□□□ -0.98
CLK3-214ENST00000564096 A0A096LPF7 62 aa8.93□□□□□ -0.98
CLK3-214ENST00000564096 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
CLK3-214ENST00000564096 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
CLK3-214ENST00000564096 IGLL5B9A064 214 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 UBE2L6O14933 153 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 TIRAPP58753 221 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 LINC00310P59036 64 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 PKIAP61925 76 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 CEMP1Q6PRD7 247 aaPredicted RBP8.92□□□□□ -0.98
CLK3-214ENST00000564096 URB1-AS1Q96HZ7 61 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 CYSLTR1Q9Y271 337 aa8.92□□□□□ -0.98
CLK3-214ENST00000564096 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
CLK3-214ENST00000564096 TCTAP57738 103 aa8.91□□□□□ -0.98
CLK3-214ENST00000564096 SNRPEP62304 92 aaKnown RBP8.91□□□□□ -0.98
CLK3-214ENST00000564096 PDZD11Q5EBL8 140 aa8.91□□□□□ -0.98
CLK3-214ENST00000564096 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
CLK3-214ENST00000564096 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
CLK3-214ENST00000564096 HIST3H2BBQ8N257 126 aa8.9□□□□□ -0.98
CLK3-214ENST00000564096 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
CLK3-214ENST00000564096 WWC2-AS2Q96NR7 200 aa8.9□□□□□ -0.98
CLK3-214ENST00000564096 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
CLK3-214ENST00000564096 H7C423 109 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 LELP1Q5T871 98 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 C20orf203Q8NBC4 194 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 CHCHD5Q9BSY4 110 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
CLK3-214ENST00000564096 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 FAM19A2Q8N3H0 131 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 MUC7Q8TAX7 377 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 DEFB104AQ8WTQ1 72 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 TOMM6Q96B49 74 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
CLK3-214ENST00000564096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.87□□□□□ -0.99
CLK3-214ENST00000564096 IGKV2-29A2NJV5 120 aaPredicted RBP8.87□□□□□ -0.99
CLK3-214ENST00000564096 NUPR1O60356 82 aa8.87□□□□□ -0.99
CLK3-214ENST00000564096 ATP5LO75964 103 aa8.87□□□□□ -0.99
CLK3-214ENST00000564096 CCL18P55774 89 aa8.87□□□□□ -0.99
CLK3-214ENST00000564096 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
CLK3-214ENST00000564096 A0A096LNJ9 63 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 NPSP0C0P6 89 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 FABP4P15090 132 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 ZNF25P17030 456 aaPredicted RBP8.86□□□□□ -0.99
CLK3-214ENST00000564096 PAPPA-AS1Q5QFB9 102 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 LYPD5Q6UWN5 251 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 TMEM141Q96I45 108 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 TMEM101Q96IK0 257 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
CLK3-214ENST00000564096 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
CLK3-214ENST00000564096 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
CLK3-214ENST00000564096 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
CLK3-214ENST00000564096 Q6ZN92 141 aa8.85□□□□□ -0.99
CLK3-214ENST00000564096 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
CLK3-214ENST00000564096 FGF6P10767 208 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 GAGE6Q13070 117 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 ERASQ7Z444 233 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 MRPL52Q86TS9 123 aaKnown RBP8.84□□□□□ -0.99
CLK3-214ENST00000564096 UBE2DNLQ8IWF7 75 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 OR5A1Q8NGJ0 315 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
CLK3-214ENST00000564096 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
CLK3-214ENST00000564096 A0A087WX48 190 aa8.83□□□□□ -1
CLK3-214ENST00000564096 TMEM262E9PQX1 116 aa8.83□□□□□ -1
CLK3-214ENST00000564096 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
CLK3-214ENST00000564096 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
CLK3-214ENST00000564096 APLNQ9ULZ1 77 aa8.83□□□□□ -1
CLK3-214ENST00000564096 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
CLK3-214ENST00000564096 COL7A1Q02388 2944 aa8.83□□□□□ -1
CLK3-214ENST00000564096 TGP01266 2768 aa8.83□□□□□ -1
CLK3-214ENST00000564096 ESRGQ1W209 222 aa8.82□□□□□ -1
CLK3-214ENST00000564096 C20orf202A1L168 122 aa8.81□□□□□ -1
CLK3-214ENST00000564096 IGIPA6NJ69 53 aa8.81□□□□□ -1
CLK3-214ENST00000564096 C3orf84H3BNL1 204 aa8.81□□□□□ -1
CLK3-214ENST00000564096 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
CLK3-214ENST00000564096 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
CLK3-214ENST00000564096 C2orf88Q9BSF0 95 aa8.81□□□□□ -1
CLK3-214ENST00000564096 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
CLK3-214ENST00000564096 A0A1B0GUV1 79 aa8.8□□□□□ -1
CLK3-214ENST00000564096 IFITM10A6NMD0 228 aa8.8□□□□□ -1
CLK3-214ENST00000564096 KRTDAPP60985 99 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms