RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SLC51BQ86UW2 128 aa6.17□□□□□ -1.42
CLN6-203ENST00000563917 C9orf62Q8N4C0 152 aa6.17□□□□□ -1.42
CLN6-203ENST00000563917 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
CLN6-203ENST00000563917 TEX261Q6UWH6 196 aa6.16□□□□□ -1.42
CLN6-203ENST00000563917 C20orf203Q8NBC4 194 aa6.16□□□□□ -1.42
CLN6-203ENST00000563917 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
CLN6-203ENST00000563917 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
CLN6-203ENST00000563917 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
CLN6-203ENST00000563917 RPP21Q9H633 154 aaKnown RBP6.16□□□□□ -1.42
CLN6-203ENST00000563917 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 CTRLP40313 264 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 SDIM1Q6ZPB5 146 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 RNF185Q96GF1 192 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
CLN6-203ENST00000563917 NCR2O95944 276 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 APCSP02743 223 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
CLN6-203ENST00000563917 KRTAP26-1Q6PEX3 210 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
CLN6-203ENST00000563917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CLN6-203ENST00000563917 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 TRBV20OR9-2A0A075B6H5 130 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 H7C423 109 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 GATCO43716 136 aaKnown RBP6.13□□□□□ -1.43
CLN6-203ENST00000563917 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
CLN6-203ENST00000563917 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 TCTE3Q8IZS6 198 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 GATD1Q8NB37 220 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 CNFNQ9BYD5 112 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 RNASE7Q9H1E1 156 aaKnown RBP6.13□□□□□ -1.43
CLN6-203ENST00000563917 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
CLN6-203ENST00000563917 TRAV26-2A0A0B4J265 109 aa6.12□□□□□ -1.43
CLN6-203ENST00000563917 A8MWL6 223 aa6.12□□□□□ -1.43
CLN6-203ENST00000563917 PMCHP20382 165 aa6.12□□□□□ -1.43
CLN6-203ENST00000563917 RPS10P46783 165 aaKnown RBP6.12□□□□□ -1.43
CLN6-203ENST00000563917 CEBPGP53567 150 aa6.12□□□□□ -1.43
CLN6-203ENST00000563917 OCC1Q8TAD7 63 aa6.12□□□□□ -1.43
CLN6-203ENST00000563917 SDHAF1A6NFY7 115 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 I3L3M4 83 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
CLN6-203ENST00000563917 Q6ZRU5 148 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 CHCHD10Q8WYQ3 142 aaPredicted RBP6.11□□□□□ -1.43
CLN6-203ENST00000563917 FAM210AQ96ND0 272 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 GFRA4Q9GZZ7 299 aa6.11□□□□□ -1.43
CLN6-203ENST00000563917 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.1□□□□□ -1.43
CLN6-203ENST00000563917 A0A087WYN8 130 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 IGKV2-29A2NJV5 120 aaPredicted RBP6.1□□□□□ -1.43
CLN6-203ENST00000563917 PANO1I0J062 215 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 K7EN84 100 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 FGF6P10767 208 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
CLN6-203ENST00000563917 MAJINQ3KP22 176 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 Q6ZNX1 250 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 OR5A1Q8NGJ0 315 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 RPL39LQ96EH5 51 aaKnown RBP6.1□□□□□ -1.43
CLN6-203ENST00000563917 ST20Q9HBF5 79 aa6.1□□□□□ -1.43
CLN6-203ENST00000563917 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
CLN6-203ENST00000563917 CHTF8P0CG12 524 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 COX6A2Q02221 97 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 SS18Q15532 418 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 FAM231DQ6ZW35 169 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 SPACA4Q8TDM5 124 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 GTSF1Q8WW33 167 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 MRAP2Q96G30 205 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 EIF5A2Q9GZV4 153 aaKnown RBP6.09□□□□□ -1.43
CLN6-203ENST00000563917 LINC00474Q9P2X8 69 aa6.09□□□□□ -1.43
CLN6-203ENST00000563917 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
CLN6-203ENST00000563917 SLPIP03973 132 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 XCL1P47992 114 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 CT83Q5H943 113 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 ALKAL2Q6UX46 152 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 AKAP14Q86UN6 197 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 C15orf56Q8N910 161 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 SMIM7Q9BQ49 75 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
CLN6-203ENST00000563917 IGHV1-58A0A0C4DH39 117 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 A0A1B0GUT8 65 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 ZNF561-AS1K7EIQ3 104 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 PPP1R17O96001 155 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 FCER1GP30273 86 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 HNRNPA3P51991 378 aaKnown RBP6.07□□□□□ -1.44
CLN6-203ENST00000563917 FOXA3P55318 350 aaPredicted RBP6.07□□□□□ -1.44
CLN6-203ENST00000563917 STPG4Q8N801 248 aa6.07□□□□□ -1.44
CLN6-203ENST00000563917 C7orf77A4D0Y5 90 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 FAM231BA6NCW3 169 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 ZNF727A8MUV8 499 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 PHOX2AO14813 284 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 CCL25O15444 150 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 MALP21145 153 aa6.06□□□□□ -1.44
CLN6-203ENST00000563917 RIGQ13278 110 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms