RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 CARHSP1Q9Y2V2 147 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-203ENST00000563404 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 F2Z2F3 143 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 PANO1I0J062 215 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 OR5AL1P0C617 328 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 RPL37AP61513 92 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
HDGFL3-203ENST00000563404 SNAI2O43623 268 aa10.81□□□□□ -0.68
HDGFL3-203ENST00000563404 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
HDGFL3-203ENST00000563404 ADCYAP1P18509 176 aa10.81□□□□□ -0.68
HDGFL3-203ENST00000563404 CHCHD5Q9BSY4 110 aa10.81□□□□□ -0.68
HDGFL3-203ENST00000563404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-203ENST00000563404 MT-ND4LP03901 98 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 ANAPC16Q96DE5 110 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 PRR34Q9NV39 138 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 V9GYV3 84 aa10.8□□□□□ -0.68
HDGFL3-203ENST00000563404 MIAQ16674 131 aa10.79□□□□□ -0.68
HDGFL3-203ENST00000563404 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
HDGFL3-203ENST00000563404 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
HDGFL3-203ENST00000563404 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
HDGFL3-203ENST00000563404 SSTP61278 116 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 RBX1P62877 108 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 GAGE6Q13070 117 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 DGAT2L7PQ6IED9 249 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 SLC7A5P1Q8MH63 180 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
HDGFL3-203ENST00000563404 CACNG7P62955 275 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 SDIM1Q6ZPB5 146 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 LINC00269Q8N2A0 174 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 CTDSP1Q9GZU7 261 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 TNXBP22105 4242 aa10.77□□□□□ -0.69
HDGFL3-203ENST00000563404 F5H697 171 aa10.76□□□□□ -0.69
HDGFL3-203ENST00000563404 CTRLP40313 264 aa10.76□□□□□ -0.69
HDGFL3-203ENST00000563404 PKIAP61925 76 aa10.76□□□□□ -0.69
HDGFL3-203ENST00000563404 SPANXN1Q5VSR9 72 aa10.76□□□□□ -0.69
HDGFL3-203ENST00000563404 SVBPQ8N300 66 aa10.76□□□□□ -0.69
HDGFL3-203ENST00000563404 SMIM27A0A1W2PRY6 76 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 GZMBP10144 247 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 RHEBQ15382 184 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 IMMP2LQ96T52 175 aa10.75□□□□□ -0.69
HDGFL3-203ENST00000563404 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
HDGFL3-203ENST00000563404 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
HDGFL3-203ENST00000563404 CLRN3Q8NCR9 226 aa10.74□□□□□ -0.69
HDGFL3-203ENST00000563404 NAT8BQ9UHF3 227 aa10.74□□□□□ -0.69
HDGFL3-203ENST00000563404 TRBV25-1A0A075B6N4 114 aa10.73□□□□□ -0.69
HDGFL3-203ENST00000563404 HIGD1CA8MV81 97 aa10.73□□□□□ -0.69
HDGFL3-203ENST00000563404 SNAPINO95295 136 aa10.73□□□□□ -0.69
HDGFL3-203ENST00000563404 IQCJQ1A5X6 159 aa10.73□□□□□ -0.69
HDGFL3-203ENST00000563404 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
HDGFL3-203ENST00000563404 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 M0QY20 66 aa10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 APOC3P02656 99 aa10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 C20orf203Q8NBC4 194 aa10.72□□□□□ -0.69
HDGFL3-203ENST00000563404 A0A1B0GW15 77 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 SLPIP03973 132 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 SMIM17P0DL12 118 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 REG3AQ06141 175 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 TPPP3Q9BW30 176 aa10.71□□□□□ -0.69
HDGFL3-203ENST00000563404 IGHV1-24A0A0C4DH33 117 aa10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 TRGC1P0CF51 173 aa10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 NTF3P20783 257 aa10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 CNBPP62633 177 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
HDGFL3-203ENST00000563404 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
HDGFL3-203ENST00000563404 TRAV9-1A0A075B6T8 112 aa10.69□□□□□ -0.7
HDGFL3-203ENST00000563404 MGPP08493 103 aa10.69□□□□□ -0.7
HDGFL3-203ENST00000563404 RIGQ13278 110 aa10.69□□□□□ -0.7
HDGFL3-203ENST00000563404 SUMO4Q6EEV6 95 aa10.69□□□□□ -0.7
HDGFL3-203ENST00000563404 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
HDGFL3-203ENST00000563404 CHTF8P0CG12 524 aa10.68□□□□□ -0.7
HDGFL3-203ENST00000563404 TWIST1Q15672 202 aa10.68□□□□□ -0.7
HDGFL3-203ENST00000563404 ATP5L2Q7Z4Y8 100 aa10.68□□□□□ -0.7
HDGFL3-203ENST00000563404 S100A8P05109 93 aa10.67□□□□□ -0.7
HDGFL3-203ENST00000563404 Q6ZRU5 148 aa10.67□□□□□ -0.7
HDGFL3-203ENST00000563404 SMIM15Q7Z3B0 74 aa10.67□□□□□ -0.7
HDGFL3-203ENST00000563404 BTF3L4Q96K17 158 aa10.67□□□□□ -0.7
HDGFL3-203ENST00000563404 RPS10P5Q9NQ39 176 aa10.67□□□□□ -0.7
HDGFL3-203ENST00000563404 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
HDGFL3-203ENST00000563404 RNF213Q63HN8 5207 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.7
HDGFL3-203ENST00000563404 A0A087WYN8 130 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms