RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 AGRNO00468 2067 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 DOCK9Q9BZ29 2069 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 IGHV3-49A0A0A0MS15 119 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 IGHV7-4-1A0A0J9YVY3 117 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 C16orf90A8MZG2 172 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 H7BZZ5 65 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 PRB1P04280 392 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 SAA1P0DJI8 122 aaPredicted RBP3.26□□□□□ -1.89
SMG1-207ENST00000563235 IGHV3-30-3P0DP02 117 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 SYCNQ0VAF6 134 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 LINC00574Q9H8X3 128 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 CNOT1A5YKK6 2376 aaKnown RBP3.26□□□□□ -1.89
SMG1-207ENST00000563235 IGHV3-21A0A0B4J1V1 117 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 PMS2P5A8MQ11 134 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 LY6HO94772 140 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 DMDP11532 3685 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 ZNF56Q15929 161 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 FBN2P35556 2912 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 TRAV3A0A0B4J244 114 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 A8MU10 97 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 SOCS3O14543 225 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 FXYD7P58549 80 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 C15orf32Q32M92 178 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
SMG1-207ENST00000563235 MRPL35Q9NZE8 188 aaKnown RBP3.26□□□□□ -1.89
SMG1-207ENST00000563235 HECTD1Q9ULT8 2610 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 LECT2O14960 151 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 IGHV1-69P01742 117 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 TLX1NBP0CAT3 122 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 C1orf134Q5TEV5 83 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 IGFL4Q6B9Z1 124 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 CYYR1Q96J86 154 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 ZZEF1O43149 2961 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 HEATR5BQ9P2D3 2071 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 ABCA7Q8IZY2 2146 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 SPTBN2O15020 2390 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 C2CD3Q4AC94 2353 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 SLC25A20O43772 301 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 LEPROTL1O95214 131 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 GDF5OSQ5U4N7 250 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 SFTA2Q6UW10 78 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 Q8NDZ9 215 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 U3KQK5 164 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 CEP295Q9C0D2 2601 aa3.25□□□□□ -1.89
SMG1-207ENST00000563235 IGF2RP11717 2491 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 IGHV5-10-1A0A0J9YXX1 117 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 A0A1B0GVX0 72 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 RPS27P42677 84 aaKnown RBP3.24□□□□□ -1.89
SMG1-207ENST00000563235 ROMO1P60602 79 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 PSENENQ9NZ42 101 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 TEX15Q9BXT5 2789 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 TRIOO75962 3097 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 SDK2Q58EX2 2172 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 TCRBV4S1A1TA0A5B7 111 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 H3BSH0 61 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 LYZL1Q6UWQ5 148 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 SMCR5Q8TEV8 140 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 MUC22E2RYF6 1773 aaPredicted RBP3.24□□□□□ -1.89
SMG1-207ENST00000563235 FRYQ5TBA9 3013 aa3.24□□□□□ -1.89
SMG1-207ENST00000563235 P0C879 139 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 FXYD2P54710 66 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.23□□□□□ -1.89
SMG1-207ENST00000563235 H3BMM0 161 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 ESRGQ1W209 222 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 C6orf201Q7Z4U5 140 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 UBE2WQ96B02 151 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 K7ERS5 55 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 CISD3P0C7P0 127 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 ZNF22P17026 224 aaPredicted RBP3.23□□□□□ -1.89
SMG1-207ENST00000563235 MIAQ16674 131 aa3.23□□□□□ -1.89
SMG1-207ENST00000563235 SPTA1P02549 2419 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 IGLV2-14P01704 120 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 ZNF818PQ6ZRF7 136 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 PROK2Q9HC23 129 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 TRBV6-6A0A0A6YYG2 114 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 XCL1P47992 114 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 FXYD4P59646 89 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 ADAMTS9Q9P2N4 1935 aa3.22□□□□□ -1.89
SMG1-207ENST00000563235 CACNA1IQ9P0X4 2223 aa3.21□□□□□ -1.89
SMG1-207ENST00000563235 NCOA6Q14686 2063 aaPredicted RBP3.21□□□□□ -1.89
SMG1-207ENST00000563235 TRAV13-2A0A0B4J235 113 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 LINC01546A6NGU7 62 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 SH2D1AO60880 128 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 CRPP02741 224 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 GCHFRP30047 84 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 UBE2D3P61077 147 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 UBE2D2P62837 147 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 TFF3Q07654 80 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 DYNLRB2Q8TF09 96 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 TMEM141Q96I45 108 aa3.21□□□□□ -1.9
SMG1-207ENST00000563235 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms