RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	CT83	Q5H943	113 aa		14.2	□□□□□ -0.14
PPP4C-205	ENST00000563200	EIF5A2	Q9GZV4	153 aa	Known RBP	14.2	□□□□□ -0.14
PPP4C-205	ENST00000563200	TRAV26-2	A0A0B4J265	109 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200		A0A1B0GUV1	79 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200		A8MWL6	223 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	FAM229A	H3BQW9	127 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	CLPSL2	Q6UWE3	100 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	LINC01551	Q86U37	167 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	C20orf203	Q8NBC4	194 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	TMEM243	Q9BU79	118 aa		14.19	□□□□□ -0.14
PPP4C-205	ENST00000563200	RAB14	P61106	215 aa		14.18	□□□□□ -0.14
PPP4C-205	ENST00000563200	C14orf177	Q52M58	125 aa		14.18	□□□□□ -0.14
PPP4C-205	ENST00000563200	DEFB104A	Q8WTQ1	72 aa		14.18	□□□□□ -0.14
PPP4C-205	ENST00000563200	SMIM7	Q9BQ49	75 aa		14.18	□□□□□ -0.14
PPP4C-205	ENST00000563200	USP17L23	D6RBM5	183 aa		14.17	□□□□□ -0.14
PPP4C-205	ENST00000563200	SRP19	P09132	144 aa	Known RBP	14.17	□□□□□ -0.14
PPP4C-205	ENST00000563200	IGLV4-60	A0A075B6I1	120 aa		14.16	□□□□□ -0.14
PPP4C-205	ENST00000563200	HLA-DQA1	P01909	254 aa		14.16	□□□□□ -0.14
PPP4C-205	ENST00000563200	REG3A	Q06141	175 aa		14.16	□□□□□ -0.14
PPP4C-205	ENST00000563200	TEX261	Q6UWH6	196 aa		14.16	□□□□□ -0.14
PPP4C-205	ENST00000563200	GFRA4	Q9GZZ7	299 aa		14.16	□□□□□ -0.14
PPP4C-205	ENST00000563200	LINC00862	A6NCI5	91 aa		14.15	□□□□□ -0.14
PPP4C-205	ENST00000563200	COTL1	Q14019	142 aa		14.15	□□□□□ -0.14
PPP4C-205	ENST00000563200	RPL39L	Q96EH5	51 aa	Known RBP	14.15	□□□□□ -0.14
PPP4C-205	ENST00000563200	ZNF727	A8MUV8	499 aa		14.15	□□□□□ -0.14
PPP4C-205	ENST00000563200	SMIM15	Q7Z3B0	74 aa		14.15	□□□□□ -0.14
PPP4C-205	ENST00000563200	PRSS1	P07477	247 aa		14.14	□□□□□ -0.15
PPP4C-205	ENST00000563200	AMT	P48728	403 aa		14.14	□□□□□ -0.15
PPP4C-205	ENST00000563200	CLLU1	Q5K131	121 aa		14.14	□□□□□ -0.15
PPP4C-205	ENST00000563200	TSKU	Q8WUA8	353 aa		14.14	□□□□□ -0.15
PPP4C-205	ENST00000563200	OSTC	Q9NRP0	149 aa		14.14	□□□□□ -0.15
PPP4C-205	ENST00000563200	SCX	Q7RTU7	201 aa		14.13	□□□□□ -0.15
PPP4C-205	ENST00000563200	IGLV10-54	A0A075B6I4	117 aa		14.12	□□□□□ -0.15
PPP4C-205	ENST00000563200	TRAV8-4	A0A0B4J246	113 aa		14.12	□□□□□ -0.15
PPP4C-205	ENST00000563200	FAM231B	A6NCW3	169 aa		14.12	□□□□□ -0.15
PPP4C-205	ENST00000563200	HIGD1C	A8MV81	97 aa		14.12	□□□□□ -0.15
PPP4C-205	ENST00000563200	CHAC1	Q9BUX1	264 aa		14.12	□□□□□ -0.15
PPP4C-205	ENST00000563200	UBE2L6	O14933	153 aa		14.11	□□□□□ -0.15
PPP4C-205	ENST00000563200	NCR2	O95944	276 aa		14.1	□□□□□ -0.15
PPP4C-205	ENST00000563200	TRBV6-5	A0A0K0K1A5	114 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200		A0A1B0GUT8	65 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200	SDHAF1	A6NFY7	115 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200	GAS8-AS1	O95177	125 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200	DGAT2L7P	Q6IED9	249 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200	LINC00528	Q8N1L1	170 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200		V9GYV3	84 aa		14.09	□□□□□ -0.15
PPP4C-205	ENST00000563200		C9JQL5	133 aa		14.08	□□□□□ -0.15
PPP4C-205	ENST00000563200	CIRBP-AS1	Q8TBR5	109 aa		14.08	□□□□□ -0.15
PPP4C-205	ENST00000563200	TMEM191A	Q9H0A3	160 aa		14.08	□□□□□ -0.15
PPP4C-205	ENST00000563200	CLRN3	Q8NCR9	226 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	ISOC2	Q96AB3	205 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	BORCS7	Q96B45	105 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	TMEM241	Q24JQ0	296 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	FAM74A3	Q4VXF1	159 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	C9orf163	Q8N9P6	203 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200	RNF185	Q96GF1	192 aa		14.07	□□□□□ -0.16
PPP4C-205	ENST00000563200		H7C423	109 aa		14.06	□□□□□ -0.16
PPP4C-205	ENST00000563200	RPL23	P62829	140 aa	Known RBP	14.06	□□□□□ -0.16
PPP4C-205	ENST00000563200	APCS	P02743	223 aa		14.05	□□□□□ -0.16
PPP4C-205	ENST00000563200	PLA2G1B	P04054	148 aa	Known RBP	14.05	□□□□□ -0.16
PPP4C-205	ENST00000563200	RAB4A	P20338	218 aa		14.05	□□□□□ -0.16
PPP4C-205	ENST00000563200	SRSF3	P84103	164 aa	Known RBP	14.05	□□□□□ -0.16
PPP4C-205	ENST00000563200	NUP35	Q8NFH5	326 aa		14.05	□□□□□ -0.16
PPP4C-205	ENST00000563200	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	14.04	□□□□□ -0.16
PPP4C-205	ENST00000563200	IGKV2-29	A2NJV5	120 aa	Predicted RBP	14.04	□□□□□ -0.16
PPP4C-205	ENST00000563200		I3L3M4	83 aa		14.04	□□□□□ -0.16
PPP4C-205	ENST00000563200	RPS10	P46783	165 aa	Known RBP	14.03	□□□□□ -0.16
PPP4C-205	ENST00000563200	CNBP	P62633	177 aa	Known RBP	14.03	□□□□□ -0.16
PPP4C-205	ENST00000563200	AMN1	Q8IY45	258 aa		14.03	□□□□□ -0.16
PPP4C-205	ENST00000563200	FGF6	P10767	208 aa		14.02	□□□□□ -0.16
PPP4C-205	ENST00000563200	ESD	P10768	282 aa		14.02	□□□□□ -0.16
PPP4C-205	ENST00000563200	POLR2K	P53803	58 aa	Known RBP	14.02	□□□□□ -0.16
PPP4C-205	ENST00000563200	KRTAP10-4	P60372	401 aa	Predicted RBP	14.02	□□□□□ -0.16
PPP4C-205	ENST00000563200	ST20	Q9HBF5	79 aa		14.02	□□□□□ -0.16
PPP4C-205	ENST00000563200	LRP1	Q07954	4544 aa	Known RBP	14.02	□□□□□ -0.17
PPP4C-205	ENST00000563200	TSHB	P01222	138 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	PMCH	P20382	165 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	AMMECR1L	Q6DCA0	310 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	SDIM1	Q6ZPB5	146 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	MRAP2	Q96G30	205 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	SMDT1	Q9H4I9	107 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	NAT8	Q9UHE5	227 aa		14.01	□□□□□ -0.17
PPP4C-205	ENST00000563200	SLPI	P03973	132 aa		14	□□□□□ -0.17
PPP4C-205	ENST00000563200	PEA15	Q15121	130 aa		14	□□□□□ -0.17
PPP4C-205	ENST00000563200	ADIRF	Q15847	76 aa		14	□□□□□ -0.17
PPP4C-205	ENST00000563200	RNASEK	Q6P5S7	137 aa	Known RBP	14	□□□□□ -0.17
PPP4C-205	ENST00000563200	NAT8B	Q9UHF3	227 aa		14	□□□□□ -0.17
PPP4C-205	ENST00000563200	TRBV27	A0A0K0K1C4	114 aa		13.99	□□□□□ -0.17
PPP4C-205	ENST00000563200	hDV102S1	A0JD36	115 aa		13.99	□□□□□ -0.17
PPP4C-205	ENST00000563200	RIG	Q13278	110 aa		13.99	□□□□□ -0.17
PPP4C-205	ENST00000563200	SMIM27	A0A1W2PRY6	76 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	GAGE12H	A6NDE8	117 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	ZNF25	P17030	456 aa	Predicted RBP	13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	COMMD7	Q86VX2	200 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	C15orf56	Q8N910	161 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	TMEM242	Q9NWH2	141 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	IGKV3OR2-268	A0A0C4DH90	116 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	PANO1	I0J062	215 aa		13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.98	□□□□□ -0.17
PPP4C-205	ENST00000563200	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms