RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CCL25O15444 150 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 PF4P02776 101 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 RPL35AP18077 110 aaKnown RBP7.07□□□□□ -1.28
SMG1-205ENST00000561947 FXYD2P54710 66 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 CEND1Q8N111 149 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 OR4C5Q8NGB2 326 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 ZNRF2Q8NHG8 242 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
SMG1-205ENST00000561947 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
SMG1-205ENST00000561947 TM2D2Q9BX73 214 aa7.06□□□□□ -1.28
SMG1-205ENST00000561947 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
SMG1-205ENST00000561947 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
SMG1-205ENST00000561947 C1QTNF4Q9BXJ3 329 aa7.06□□□□□ -1.28
SMG1-205ENST00000561947 HECTD1Q9ULT8 2610 aa7.06□□□□□ -1.28
SMG1-205ENST00000561947 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 TMEM170BQ5T4T1 132 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 Q6ZTI0 123 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 VCX2Q9H322 139 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 K7EP13 123 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
SMG1-205ENST00000561947 SETXQ7Z333 2677 aaKnown RBP7.04□□□□□ -1.28
SMG1-205ENST00000561947 TRBV7-3A0A075B6L6 115 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 TRAV4A0A0B4J268 109 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 CRYBA4P53673 196 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 DAZ2Q13117 558 aaKnown RBP7.04□□□□□ -1.28
SMG1-205ENST00000561947 CSNK1G2-AS1Q8NCQ2 148 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
SMG1-205ENST00000561947 FAM104AQ969W3 186 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 ZNF479Q96JC4 524 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 AMELXQ99217 191 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 IGHV3-38A0A0C4DH36 116 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 COTL1Q14019 142 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 RAB37Q96AX2 223 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 NOP10Q9NPE3 64 aaKnown RBP7.04□□□□□ -1.28
SMG1-205ENST00000561947 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
SMG1-205ENST00000561947 A0A0J9YXV3 536 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 CEMP1Q6PRD7 247 aaPredicted RBP7.03□□□□□ -1.28
SMG1-205ENST00000561947 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.03□□□□□ -1.28
SMG1-205ENST00000561947 TRBV10-1A0A0K0K1A3 114 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 IGKV2-29A2NJV5 120 aaPredicted RBP7.03□□□□□ -1.28
SMG1-205ENST00000561947 H3BUT2 72 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 K7EQD1 137 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
SMG1-205ENST00000561947 TSPEAR-AS2P59090 65 aa7.03□□□□□ -1.28
SMG1-205ENST00000561947 OTOGQ6ZRI0 2925 aa7.02□□□□□ -1.28
SMG1-205ENST00000561947 RRN3P1Q2M238 152 aa7.02□□□□□ -1.29
SMG1-205ENST00000561947 SCGB1D4Q6XE38 83 aa7.02□□□□□ -1.29
SMG1-205ENST00000561947 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.29
SMG1-205ENST00000561947 K7ERJ3 54 aa7.02□□□□□ -1.29
SMG1-205ENST00000561947 NAA38Q9BRA0 125 aaKnown RBP7.02□□□□□ -1.29
SMG1-205ENST00000561947 OVOL2Q9BRP0 275 aa7.02□□□□□ -1.29
SMG1-205ENST00000561947 J3QQQ9 107 aa7.01□□□□□ -1.29
SMG1-205ENST00000561947 LEPROTO15243 131 aa7.01□□□□□ -1.29
SMG1-205ENST00000561947 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
SMG1-205ENST00000561947 RPL36AP83881 106 aaKnown RBP7.01□□□□□ -1.29
SMG1-205ENST00000561947 RPL36ALQ969Q0 106 aaKnown RBP7.01□□□□□ -1.29
SMG1-205ENST00000561947 LGALS3P17931 250 aaKnown RBP7.01□□□□□ -1.29
SMG1-205ENST00000561947 A0A1W2PPM0 123 aa7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE12BA1L429 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE7O76087 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE12FP0CL80 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE12GP0CL81 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE12IP0CL82 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 INSL3P51460 131 aa7□□□□□ -1.29
SMG1-205ENST00000561947 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
SMG1-205ENST00000561947 Q6ZUT4 128 aa7□□□□□ -1.29
SMG1-205ENST00000561947 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
SMG1-205ENST00000561947 JMJD1CQ15652 2540 aa7□□□□□ -1.29
SMG1-205ENST00000561947 TRGV2A0A075B6R0 118 aa7□□□□□ -1.29
SMG1-205ENST00000561947 A0A0J9YY99 117 aa7□□□□□ -1.29
SMG1-205ENST00000561947 CIDEAO60543 219 aa7□□□□□ -1.29
SMG1-205ENST00000561947 CRLF1O75462 422 aa7□□□□□ -1.29
SMG1-205ENST00000561947 C12orf74Q32Q52 190 aa7□□□□□ -1.29
SMG1-205ENST00000561947 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
SMG1-205ENST00000561947 DAZ4Q86SG3 579 aaKnown RBP7□□□□□ -1.29
SMG1-205ENST00000561947 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
SMG1-205ENST00000561947 DAZ3Q9NR90 486 aaKnown RBP7□□□□□ -1.29
SMG1-205ENST00000561947 GAGE10A6NGK3 116 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 UBE2D3P61077 147 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 UBE2D2P62837 147 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 NIPBLQ6KC79 2804 aaeCLIP6.99□□□□□ -1.29
SMG1-205ENST00000561947 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 A0A1B0GWB2 263 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 K7EP34 96 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 SAMD5Q5TGI4 173 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 SPATA3Q8NHX4 192 aa6.99□□□□□ -1.29
SMG1-205ENST00000561947 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
SMG1-205ENST00000561947 FN1P02751 2386 aaKnown RBP6.98□□□□□ -1.29
SMG1-205ENST00000561947 C2CD3Q4AC94 2353 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms