RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 DEFA1P59665 94 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 DEFA3P59666 94 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 AKR1C8PQ5T2L2 129 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 CST9LP1Q5W188 147 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 MLST8Q9BVC4 326 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 MED28Q9H204 178 aa4.23□□□□□ -1.73
AP3S2-214ENST00000560940 A0A096LNI7 61 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 MUC21A0A0G2JKD1 596 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 MUC21A0A140T8X8 626 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 IFITM3Q01628 133 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 RPL7L1Q6DKI1 246 aaKnown RBP4.22□□□□□ -1.73
AP3S2-214ENST00000560940 RASL11AQ6T310 242 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 INO80EQ8NBZ0 244 aaPredicted RBP4.22□□□□□ -1.73
AP3S2-214ENST00000560940 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 NIT2Q9NQR4 276 aa4.22□□□□□ -1.73
AP3S2-214ENST00000560940 LPAP08519 4548 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 A0A0U1RQV1 116 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 MGPP08493 103 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 AMTP48728 403 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 NKX2-5P52952 324 aaPredicted RBP4.21□□□□□ -1.74
AP3S2-214ENST00000560940 SSTP61278 116 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 COTL1Q14019 142 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 HIGD2BQ4VC39 106 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 SUMO4Q6EEV6 95 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 BAGE2Q86Y30 109 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 ZNF664Q8N3J9 261 aa4.21□□□□□ -1.74
AP3S2-214ENST00000560940 PAGE4O60829 102 aa4.2□□□□□ -1.74
AP3S2-214ENST00000560940 CACNG7P62955 275 aa4.2□□□□□ -1.74
AP3S2-214ENST00000560940 CHCHD10Q8WYQ3 142 aaPredicted RBP4.2□□□□□ -1.74
AP3S2-214ENST00000560940 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
AP3S2-214ENST00000560940 MUC2Q02817 5179 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 IGKV3OR2-268A0A0C4DH90 116 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 F2Z2F3 143 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 H7C423 109 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 PFDN1O60925 122 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 TRGC1P0CF51 173 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 IGLC6P0CF74 106 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 RPS20P60866 119 aaKnown RBP4.19□□□□□ -1.74
AP3S2-214ENST00000560940 XP32Q5T750 250 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 AMMECR1LQ6DCA0 310 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 TMUB2Q71RG4 321 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 FER1L6-AS1Q8NA97 138 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 CARD19Q96LW7 228 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 TPPP3Q9BW30 176 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 ALG5Q9Y673 324 aa4.19□□□□□ -1.74
AP3S2-214ENST00000560940 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 IGHV1-58A0A0C4DH39 117 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 XKRY2A2RUG3 117 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 NCR2O95944 276 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 GIPP09681 153 aaPredicted RBP4.18□□□□□ -1.74
AP3S2-214ENST00000560940 NTF3P20783 257 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 FOXI1Q12951 378 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 Q5BKY6 102 aa4.18□□□□□ -1.74
AP3S2-214ENST00000560940 FXYD6-FXYD2A0A087WZ82 144 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
AP3S2-214ENST00000560940 PTTG1IPP53801 180 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 SYCNQ0VAF6 134 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 RNASEKQ6P5S7 137 aaKnown RBP4.17□□□□□ -1.74
AP3S2-214ENST00000560940 OR2D3Q8NGH3 330 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 OR5A1Q8NGJ0 315 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 SFT2D1Q8WV19 159 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 MBD3L1Q8WWY6 194 aa4.17□□□□□ -1.74
AP3S2-214ENST00000560940 UMAD1C9J7I0 102 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 APCSP02743 223 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 MT-ND6P03923 174 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 FGF6P10767 208 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 RPL35P42766 123 aaKnown RBP4.16□□□□□ -1.74
AP3S2-214ENST00000560940 XCL1P47992 114 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 DIRC1Q969H9 104 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 ISOC2Q96AB3 205 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 SMIM12Q96EX1 92 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 FAM210AQ96ND0 272 aa4.16□□□□□ -1.74
AP3S2-214ENST00000560940 LINC00959A0A1B0GUT2 108 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 C19orf71A6NCJ1 209 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 CCL25O15444 150 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 IFNA1P01562 189 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 CAMPP49913 170 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 SS18Q15532 418 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 TEX261Q6UWH6 196 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 CD164L2Q6UWJ8 174 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 LYZL1Q6UWQ5 148 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 Q6ZNX1 250 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 C9orf62Q8N4C0 152 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 KCNRGQ8N5I3 272 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 GATD1Q8NB37 220 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 FAM213BQ8TBF2 198 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 TMEM101Q96IK0 257 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 CYTL1Q9NRR1 136 aa4.15□□□□□ -1.75
AP3S2-214ENST00000560940 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
AP3S2-214ENST00000560940 IGLV1-50A0A075B6I6 118 aa4.14□□□□□ -1.75
AP3S2-214ENST00000560940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.14□□□□□ -1.75
AP3S2-214ENST00000560940 A0A1W2PNN7 141 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 807.2 ms