RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 MAPKAPK5-AS1Q8N8E1 139 aa13.73□□□□□ -0.21
HMBOX1-215ENST00000560599 CSNK1G2-AS1Q8NCQ2 148 aa13.73□□□□□ -0.21
HMBOX1-215ENST00000560599 VCX2Q9H322 139 aa13.73□□□□□ -0.21
HMBOX1-215ENST00000560599 OVOL2Q9BRP0 275 aa13.73□□□□□ -0.21
HMBOX1-215ENST00000560599 CHCHD7Q9BUK0 85 aa13.73□□□□□ -0.21
HMBOX1-215ENST00000560599 NACAE9PAV3 2078 aa13.72□□□□□ -0.21
HMBOX1-215ENST00000560599 RPL36AP83881 106 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-215ENST00000560599 RPL36ALQ969Q0 106 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-215ENST00000560599 NOP10Q9NPE3 64 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-215ENST00000560599 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.22
HMBOX1-215ENST00000560599 H3BRM9 83 aa13.71□□□□□ -0.22
HMBOX1-215ENST00000560599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.71□□□□□ -0.22
HMBOX1-215ENST00000560599 ZNF479Q96JC4 524 aa13.71□□□□□ -0.22
HMBOX1-215ENST00000560599 CITED1Q99966 193 aa13.71□□□□□ -0.22
HMBOX1-215ENST00000560599 GCSHP23434 173 aa13.7□□□□□ -0.22
HMBOX1-215ENST00000560599 EMP1P54849 157 aa13.7□□□□□ -0.22
HMBOX1-215ENST00000560599 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
HMBOX1-215ENST00000560599 AMELXQ99217 191 aa13.7□□□□□ -0.22
HMBOX1-215ENST00000560599 HECTD1Q9ULT8 2610 aa13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 TRBV7-3A0A075B6L6 115 aa13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 MTORP42345 2549 aa13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 ZNRF2Q8NHG8 242 aa13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 PHLDA1Q8WV24 401 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 OPRPNQ99935 248 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-215ENST00000560599 Q6ZVH6 145 aa13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 CEND1Q8N111 149 aa13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 TIMM21Q9BVV7 248 aa13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 TM2D2Q9BX73 214 aa13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 UBE2D4Q9Y2X8 147 aa13.68□□□□□ -0.22
HMBOX1-215ENST00000560599 TRGV2A0A075B6R0 118 aa13.67□□□□□ -0.22
HMBOX1-215ENST00000560599 SMAGPQ0VAQ4 97 aa13.67□□□□□ -0.22
HMBOX1-215ENST00000560599 Q9UF83 564 aa13.67□□□□□ -0.22
HMBOX1-215ENST00000560599 IGHV3-38A0A0C4DH36 116 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 GAGE12BA1L429 117 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 GAGE7O76087 117 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 VAMP3Q15836 100 aa13.66□□□□□ -0.22
HMBOX1-215ENST00000560599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 TMEM223A0PJW6 202 aa13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 IGKV2-29A2NJV5 120 aaPredicted RBP13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 ZNF22P17026 224 aaPredicted RBP13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 PTTG1IPP53801 180 aa13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
HMBOX1-215ENST00000560599 LEPROTO15243 131 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 FXYD2P54710 66 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 UBE2D3P61077 147 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 UBE2D2P62837 147 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 UBE2V1Q13404 147 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 A0A0J9YXV3 536 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 TRBV6-4A0A1B0GX49 114 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 C9orf118A6NHY6 69 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 LGALS3P17931 250 aaKnown RBP13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 SCGB1D4Q6XE38 83 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
HMBOX1-215ENST00000560599 WNK1Q9H4A3 2382 aa13.63□□□□□ -0.23
HMBOX1-215ENST00000560599 OTOGQ6ZRI0 2925 aa13.63□□□□□ -0.23
HMBOX1-215ENST00000560599 Q6ZUT4 128 aa13.63□□□□□ -0.23
HMBOX1-215ENST00000560599 TRGV4A0A0C4DH28 118 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 GAGE12JA6NER3 117 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 J3QQQ9 107 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 GAGE4Q13068 117 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 GAGE5Q13069 117 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 GAGE13Q4V321 117 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 FAM104AQ969W3 186 aa13.62□□□□□ -0.23
HMBOX1-215ENST00000560599 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
HMBOX1-215ENST00000560599 NF1P21359 2839 aa13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 APOC4P55056 127 aa13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 DGAT2L7PQ6IED9 249 aa13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 CEMP1Q6PRD7 247 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 GTSF1LQ9H1H1 148 aa13.6□□□□□ -0.23
HMBOX1-215ENST00000560599 LINC00612Q8N6U2 182 aa13.59□□□□□ -0.23
HMBOX1-215ENST00000560599 CUBNO60494 3623 aa13.59□□□□□ -0.23
HMBOX1-215ENST00000560599 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 A6NJY4 79 aa13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 SPATA3Q8NHX4 192 aa13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 SPANXB1Q9NS25 103 aaPredicted RBP13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 NHP2Q9NX24 153 aaKnown RBP13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 CSDC2Q9Y534 153 aaKnown RBP13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 SETXQ7Z333 2677 aaKnown RBP13.58□□□□□ -0.24
HMBOX1-215ENST00000560599 SBSPONQ8IVN8 264 aa13.57□□□□□ -0.24
HMBOX1-215ENST00000560599 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
HMBOX1-215ENST00000560599 A0A0J9YY99 117 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 CCL25O15444 150 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 WIPF1O43516 503 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 UBE2D1P51668 147 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 X6R8D5 127 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms