RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 ADIRFQ15847 76 aa11.64□□□□□ -0.55
RPL28-210ENST00000560583 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
RPL28-210ENST00000560583 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
RPL28-210ENST00000560583 OSTCQ9NRP0 149 aa11.64□□□□□ -0.55
RPL28-210ENST00000560583 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 NIT2Q9NQR4 276 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
RPL28-210ENST00000560583 J3QL48 77 aa11.62□□□□□ -0.55
RPL28-210ENST00000560583 ANGP03950 147 aaKnown RBP11.62□□□□□ -0.55
RPL28-210ENST00000560583 RAB14P61106 215 aa11.62□□□□□ -0.55
RPL28-210ENST00000560583 GAGE6Q13070 117 aa11.62□□□□□ -0.55
RPL28-210ENST00000560583 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
RPL28-210ENST00000560583 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
RPL28-210ENST00000560583 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
RPL28-210ENST00000560583 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
RPL28-210ENST00000560583 GFRA4Q9GZZ7 299 aa11.61□□□□□ -0.55
RPL28-210ENST00000560583 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
RPL28-210ENST00000560583 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
RPL28-210ENST00000560583 UBE2L6O14933 153 aa11.6□□□□□ -0.55
RPL28-210ENST00000560583 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
RPL28-210ENST00000560583 COTL1Q14019 142 aa11.6□□□□□ -0.55
RPL28-210ENST00000560583 ISOC2Q96AB3 205 aa11.6□□□□□ -0.55
RPL28-210ENST00000560583 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 HLA-DQA1P01909 254 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
RPL28-210ENST00000560583 KRTAP26-1Q6PEX3 210 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 PRR34Q9NV39 138 aa11.59□□□□□ -0.55
RPL28-210ENST00000560583 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 C9JQL5 133 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 AMTP48728 403 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 RBX1P62877 108 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 RIGQ13278 110 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 MIAQ16674 131 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 IQCJQ1A5X6 159 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 C14orf177Q52M58 125 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
RPL28-210ENST00000560583 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
RPL28-210ENST00000560583 V9GYV3 84 aa11.57□□□□□ -0.56
RPL28-210ENST00000560583 HMCN2Q8NDA2 5059 aa11.56□□□□□ -0.56
RPL28-210ENST00000560583 PRSS1P07477 247 aa11.56□□□□□ -0.56
RPL28-210ENST00000560583 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
RPL28-210ENST00000560583 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
RPL28-210ENST00000560583 LINC00269Q8N2A0 174 aa11.55□□□□□ -0.56
RPL28-210ENST00000560583 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
RPL28-210ENST00000560583 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
RPL28-210ENST00000560583 APCSP02743 223 aa11.53□□□□□ -0.56
RPL28-210ENST00000560583 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
RPL28-210ENST00000560583 PMCHP20382 165 aa11.52□□□□□ -0.57
RPL28-210ENST00000560583 AMMECR1LQ6DCA0 310 aa11.52□□□□□ -0.57
RPL28-210ENST00000560583 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
RPL28-210ENST00000560583 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
RPL28-210ENST00000560583 PANO1I0J062 215 aa11.51□□□□□ -0.57
RPL28-210ENST00000560583 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
RPL28-210ENST00000560583 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
RPL28-210ENST00000560583 MRAP2Q96G30 205 aa11.51□□□□□ -0.57
RPL28-210ENST00000560583 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
RPL28-210ENST00000560583 IGLV10-54A0A075B6I4 117 aa11.5□□□□□ -0.57
RPL28-210ENST00000560583 NCR2O95944 276 aa11.5□□□□□ -0.57
RPL28-210ENST00000560583 REG3AQ06141 175 aa11.5□□□□□ -0.57
RPL28-210ENST00000560583 IGLV4-60A0A075B6I1 120 aa11.49□□□□□ -0.57
RPL28-210ENST00000560583 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
RPL28-210ENST00000560583 I3L3M4 83 aa11.49□□□□□ -0.57
RPL28-210ENST00000560583 CAMPP49913 170 aa11.49□□□□□ -0.57
RPL28-210ENST00000560583 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
RPL28-210ENST00000560583 DGAT2L7PQ6IED9 249 aa11.49□□□□□ -0.57
RPL28-210ENST00000560583 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
RPL28-210ENST00000560583 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
RPL28-210ENST00000560583 S100A8P05109 93 aa11.48□□□□□ -0.57
RPL28-210ENST00000560583 RAB4AP20338 218 aa11.48□□□□□ -0.57
RPL28-210ENST00000560583 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
RPL28-210ENST00000560583 A0A1B0GW15 77 aa11.47□□□□□ -0.57
RPL28-210ENST00000560583 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
RPL28-210ENST00000560583 PPP1R17O96001 155 aa11.47□□□□□ -0.57
RPL28-210ENST00000560583 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
RPL28-210ENST00000560583 RNF185Q96GF1 192 aa11.47□□□□□ -0.57
RPL28-210ENST00000560583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
RPL28-210ENST00000560583 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
RPL28-210ENST00000560583 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 CLLU1Q5K131 121 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 MRPL54Q6P161 138 aaKnown RBP11.46□□□□□ -0.57
RPL28-210ENST00000560583 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 BTF3L4Q96K17 158 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
RPL28-210ENST00000560583 F8W036 122 aa11.45□□□□□ -0.58
RPL28-210ENST00000560583 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
RPL28-210ENST00000560583 OXTP01178 125 aa11.45□□□□□ -0.58
RPL28-210ENST00000560583 FCER1GP30273 86 aa11.45□□□□□ -0.58
RPL28-210ENST00000560583 CNBPP62633 177 aaKnown RBP11.45□□□□□ -0.58
RPL28-210ENST00000560583 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
RPL28-210ENST00000560583 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
RPL28-210ENST00000560583 H7C423 109 aa11.44□□□□□ -0.58
RPL28-210ENST00000560583 RPS10P46783 165 aaKnown RBP11.44□□□□□ -0.58
RPL28-210ENST00000560583 HBBP68871 147 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms