RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 LELP1Q5T871 98 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 DNAH8Q96JB1 4490 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 NUPR1O60356 82 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 IGHV3-30P01768 117 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 IGHV3-33P01772 117 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 IGHV3-30-3P0DP02 117 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 IGHV3-30-5P0DP03 117 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 FABP4P15090 132 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 BORCS7Q96B45 105 aa9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP2-207ENST00000560562 A0A087WWL8 130 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 IBA57-AS1B1ANH7 110 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 SNAI2O43623 268 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 C12orf57Q99622 126 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
TNFAIP2-207ENST00000560562 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 LRCOL1A6NCL2 159 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 M0R381 172 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 SERF1AO75920 110 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 CACNG7P62955 275 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 Q9HAA7 133 aa9.37□□□□□ -0.91
TNFAIP2-207ENST00000560562 PYY3Q5JQD4 70 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 BAGE3Q86Y29 109 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 Q8N1X5 172 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 SYT8Q8NBV8 401 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
TNFAIP2-207ENST00000560562 VPS13BQ7Z7G8 4022 aa9.35□□□□□ -0.91
TNFAIP2-207ENST00000560562 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
TNFAIP2-207ENST00000560562 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
TNFAIP2-207ENST00000560562 SPANXN1Q5VSR9 72 aa9.35□□□□□ -0.91
TNFAIP2-207ENST00000560562 RHODO00212 210 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 EREGO14944 169 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 XGP55808 180 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 SSTP61278 116 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 TWIST1Q15672 202 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 CDPF1Q6NVV7 123 aa9.34□□□□□ -0.91
TNFAIP2-207ENST00000560562 NTF3P20783 257 aa9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 WFDC2Q14508 124 aa9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
TNFAIP2-207ENST00000560562 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
TNFAIP2-207ENST00000560562 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
TNFAIP2-207ENST00000560562 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
TNFAIP2-207ENST00000560562 PSCAO43653 123 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 LAGE3Q14657 143 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 UBE2D3P61077 147 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 UBE2D2P62837 147 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 MRPL51Q4U2R6 128 aaKnown RBP9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
TNFAIP2-207ENST00000560562 SRRM2Q9UQ35 2752 aaKnown RBP9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 HAMPP81172 84 aa9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 NIT1Q86X76 327 aa9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 AMN1Q8IY45 258 aa9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 Q8N814 137 aa9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
TNFAIP2-207ENST00000560562 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
TNFAIP2-207ENST00000560562 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
TNFAIP2-207ENST00000560562 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
TNFAIP2-207ENST00000560562 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
TNFAIP2-207ENST00000560562 KIF25-AS1Q9Y6Z4 181 aa9.29□□□□□ -0.92
TNFAIP2-207ENST00000560562 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 RAB4AP20338 218 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 GCSHP23434 173 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 AMTP48728 403 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 ZNF56Q15929 161 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
TNFAIP2-207ENST00000560562 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 D6R8Y8 96 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 LECT2O14960 151 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 PPBPP02775 128 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 PRELID3AQ96N28 172 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP2-207ENST00000560562 HSBP1O75506 76 aa9.26□□□□□ -0.93
TNFAIP2-207ENST00000560562 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
TNFAIP2-207ENST00000560562 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
TNFAIP2-207ENST00000560562 LINC00614P0C842 121 aa9.25□□□□□ -0.93
TNFAIP2-207ENST00000560562 PMCHP20382 165 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms