RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 A0A096LNJ9 63 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 H3BNG1 76 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
HERC1-205ENST00000559886 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 FCER1GP30273 86 aa8.5□□□□□ -1.05
HERC1-205ENST00000559886 TMEM18Q96B42 140 aa8.5□□□□□ -1.05
HERC1-205ENST00000559886 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
HERC1-205ENST00000559886 FBN3Q75N90 2809 aa8.49□□□□□ -1.05
HERC1-205ENST00000559886 NUDT3O95989 172 aa8.49□□□□□ -1.05
HERC1-205ENST00000559886 HBDP02042 147 aa8.49□□□□□ -1.05
HERC1-205ENST00000559886 COTL1Q14019 142 aa8.49□□□□□ -1.05
HERC1-205ENST00000559886 FABP4P15090 132 aa8.48□□□□□ -1.05
HERC1-205ENST00000559886 MRPL23Q16540 153 aaKnown RBP8.48□□□□□ -1.05
HERC1-205ENST00000559886 ATP6V0E2Q8NHE4 81 aa8.48□□□□□ -1.05
HERC1-205ENST00000559886 GTSF1LQ9H1H1 148 aa8.48□□□□□ -1.05
HERC1-205ENST00000559886 ICOSQ9Y6W8 199 aa8.48□□□□□ -1.05
HERC1-205ENST00000559886 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
HERC1-205ENST00000559886 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
HERC1-205ENST00000559886 G0S2P27469 103 aa8.47□□□□□ -1.05
HERC1-205ENST00000559886 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
HERC1-205ENST00000559886 A0A096LPF7 62 aa8.47□□□□□ -1.05
HERC1-205ENST00000559886 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
HERC1-205ENST00000559886 C20orf203Q8NBC4 194 aa8.46□□□□□ -1.05
HERC1-205ENST00000559886 TOMM6Q96B49 74 aa8.46□□□□□ -1.05
HERC1-205ENST00000559886 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.05
HERC1-205ENST00000559886 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
HERC1-205ENST00000559886 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
HERC1-205ENST00000559886 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
HERC1-205ENST00000559886 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
HERC1-205ENST00000559886 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
HERC1-205ENST00000559886 LINC01549A6NIU2 74 aa8.45□□□□□ -1.06
HERC1-205ENST00000559886 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
HERC1-205ENST00000559886 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
HERC1-205ENST00000559886 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
HERC1-205ENST00000559886 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
HERC1-205ENST00000559886 TRBV25-1A0A075B6N4 114 aa8.43□□□□□ -1.06
HERC1-205ENST00000559886 ERASQ7Z444 233 aa8.43□□□□□ -1.06
HERC1-205ENST00000559886 TMEM243Q9BU79 118 aa8.43□□□□□ -1.06
HERC1-205ENST00000559886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
HERC1-205ENST00000559886 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
HERC1-205ENST00000559886 IGIPA6NJ69 53 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 ATP5LO75964 103 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 TIRAPP58753 221 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 DNAH7Q8WXX0 4024 aa8.42□□□□□ -1.06
HERC1-205ENST00000559886 LYPD5Q6UWN5 251 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
HERC1-205ENST00000559886 IGLL5B9A064 214 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 H7C423 109 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
HERC1-205ENST00000559886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.4□□□□□ -1.06
HERC1-205ENST00000559886 AKR1D1P51857 326 aa8.4□□□□□ -1.06
HERC1-205ENST00000559886 TIMM21Q9BVV7 248 aa8.4□□□□□ -1.06
HERC1-205ENST00000559886 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
HERC1-205ENST00000559886 KRTDAPP60985 99 aa8.4□□□□□ -1.07
HERC1-205ENST00000559886 LELP1Q5T871 98 aa8.4□□□□□ -1.07
HERC1-205ENST00000559886 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.07
HERC1-205ENST00000559886 TMEM141Q96I45 108 aa8.4□□□□□ -1.07
HERC1-205ENST00000559886 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.07
HERC1-205ENST00000559886 UBE2L6O14933 153 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 MRPL52Q86TS9 123 aaKnown RBP8.39□□□□□ -1.07
HERC1-205ENST00000559886 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 TGP01266 2768 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 NPSP0C0P6 89 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 FGF6P10767 208 aa8.39□□□□□ -1.07
HERC1-205ENST00000559886 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
HERC1-205ENST00000559886 SMAGPQ0VAQ4 97 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 ESRGQ1W209 222 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 CSMD3Q7Z407 3707 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 NUPR2A6NF83 97 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 GAGE6Q13070 117 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 Q6ZN92 141 aa8.38□□□□□ -1.07
HERC1-205ENST00000559886 OPRPNQ99935 248 aaPredicted RBP8.38□□□□□ -1.07
HERC1-205ENST00000559886 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
HERC1-205ENST00000559886 PRSS1P07477 247 aa8.37□□□□□ -1.07
HERC1-205ENST00000559886 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
HERC1-205ENST00000559886 ZNF25P17030 456 aaPredicted RBP8.37□□□□□ -1.07
HERC1-205ENST00000559886 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
HERC1-205ENST00000559886 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
HERC1-205ENST00000559886 PET117Q6UWS5 81 aa8.37□□□□□ -1.07
HERC1-205ENST00000559886 H0Y8G0 127 aa8.36□□□□□ -1.07
HERC1-205ENST00000559886 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
HERC1-205ENST00000559886 JOSD1Q15040 202 aaPredicted RBP8.36□□□□□ -1.07
HERC1-205ENST00000559886 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
HERC1-205ENST00000559886 Q8N976 141 aa8.36□□□□□ -1.07
HERC1-205ENST00000559886 KLK5Q9Y337 293 aaPredicted RBP8.36□□□□□ -1.07
HERC1-205ENST00000559886 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 Q6ZUT4 128 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms