RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 K7EMI3 77 aa12.52□□□□□ -0.41
CLPX-203ENST00000558958 SERF1AO75920 110 aa12.52□□□□□ -0.41
CLPX-203ENST00000558958 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
CLPX-203ENST00000558958 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
CLPX-203ENST00000558958 STARD9Q9P2P6 4700 aa12.52□□□□□ -0.41
CLPX-203ENST00000558958 FCER1GP30273 86 aa12.51□□□□□ -0.41
CLPX-203ENST00000558958 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
CLPX-203ENST00000558958 TMA7Q9Y2S6 64 aaKnown RBP12.51□□□□□ -0.41
CLPX-203ENST00000558958 NUPR1O60356 82 aa12.5□□□□□ -0.41
CLPX-203ENST00000558958 LAGE3Q14657 143 aa12.5□□□□□ -0.41
CLPX-203ENST00000558958 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
CLPX-203ENST00000558958 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
CLPX-203ENST00000558958 KLK5Q9Y337 293 aaPredicted RBP12.5□□□□□ -0.41
CLPX-203ENST00000558958 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
CLPX-203ENST00000558958 S100A6P06703 90 aa12.48□□□□□ -0.41
CLPX-203ENST00000558958 TIRAPP58753 221 aa12.48□□□□□ -0.41
CLPX-203ENST00000558958 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
CLPX-203ENST00000558958 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
CLPX-203ENST00000558958 PLECQ15149 4684 aaKnown RBP12.48□□□□□ -0.41
CLPX-203ENST00000558958 ESDP10768 282 aa12.47□□□□□ -0.41
CLPX-203ENST00000558958 CHCHD7Q9BUK0 85 aa12.47□□□□□ -0.41
CLPX-203ENST00000558958 APLNQ9ULZ1 77 aa12.47□□□□□ -0.41
CLPX-203ENST00000558958 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.41
CLPX-203ENST00000558958 HSBP1O75506 76 aa12.46□□□□□ -0.41
CLPX-203ENST00000558958 AMTP48728 403 aa12.46□□□□□ -0.41
CLPX-203ENST00000558958 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
CLPX-203ENST00000558958 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.42
CLPX-203ENST00000558958 ESRGQ1W209 222 aa12.46□□□□□ -0.42
CLPX-203ENST00000558958 TCTAP57738 103 aa12.45□□□□□ -0.42
CLPX-203ENST00000558958 PMCHL1Q16048 86 aa12.45□□□□□ -0.42
CLPX-203ENST00000558958 LELP1Q5T871 98 aa12.45□□□□□ -0.42
CLPX-203ENST00000558958 C20orf203Q8NBC4 194 aa12.45□□□□□ -0.42
CLPX-203ENST00000558958 A0A096LNJ9 63 aa12.44□□□□□ -0.42
CLPX-203ENST00000558958 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
CLPX-203ENST00000558958 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
CLPX-203ENST00000558958 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
CLPX-203ENST00000558958 SNRPEP62304 92 aaKnown RBP12.43□□□□□ -0.42
CLPX-203ENST00000558958 C5orf52A6NGY3 159 aa12.42□□□□□ -0.42
CLPX-203ENST00000558958 G0S2P27469 103 aa12.42□□□□□ -0.42
CLPX-203ENST00000558958 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
CLPX-203ENST00000558958 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
CLPX-203ENST00000558958 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
CLPX-203ENST00000558958 HBDP02042 147 aa12.41□□□□□ -0.42
CLPX-203ENST00000558958 RPL39P62891 51 aaKnown RBP12.41□□□□□ -0.42
CLPX-203ENST00000558958 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
CLPX-203ENST00000558958 CYSLTR1Q9Y271 337 aa12.41□□□□□ -0.42
CLPX-203ENST00000558958 CCL18P55774 89 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 TMEM18Q96B42 140 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 TENM2Q9NT68 2774 aa12.4□□□□□ -0.42
CLPX-203ENST00000558958 H7C423 109 aa12.4□□□□□ -0.43
CLPX-203ENST00000558958 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.43
CLPX-203ENST00000558958 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
CLPX-203ENST00000558958 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
CLPX-203ENST00000558958 UBE2L6O14933 153 aa12.39□□□□□ -0.43
CLPX-203ENST00000558958 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
CLPX-203ENST00000558958 GAGE6Q13070 117 aa12.38□□□□□ -0.43
CLPX-203ENST00000558958 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
CLPX-203ENST00000558958 LYSTQ99698 3801 aa12.37□□□□□ -0.43
CLPX-203ENST00000558958 FGF6P10767 208 aa12.37□□□□□ -0.43
CLPX-203ENST00000558958 CASC10Q5T4H9 136 aa12.37□□□□□ -0.43
CLPX-203ENST00000558958 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
CLPX-203ENST00000558958 UBE2D4Q9Y2X8 147 aa12.37□□□□□ -0.43
CLPX-203ENST00000558958 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
CLPX-203ENST00000558958 PACRGQ96M98 296 aaPredicted RBP12.36□□□□□ -0.43
CLPX-203ENST00000558958 TIMM21Q9BVV7 248 aa12.36□□□□□ -0.43
CLPX-203ENST00000558958 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
CLPX-203ENST00000558958 IFITM10A6NMD0 228 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 S100A2P29034 98 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 SMAGPQ0VAQ4 97 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 ERASQ7Z444 233 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 WFDC10BQ8IUB3 73 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 SPANXA1Q9NS26 97 aa12.35□□□□□ -0.43
CLPX-203ENST00000558958 FABP4P15090 132 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 PKIAP61925 76 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 HIST1H2BLQ99880 126 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 CSDC2Q9Y534 153 aaKnown RBP12.34□□□□□ -0.43
CLPX-203ENST00000558958 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
CLPX-203ENST00000558958 MPV17L2Q567V2 206 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 LINC00173Q6ZV60 143 aa12.34□□□□□ -0.43
CLPX-203ENST00000558958 ATP5LO75964 103 aa12.33□□□□□ -0.44
CLPX-203ENST00000558958 RBX1P62877 108 aa12.33□□□□□ -0.44
CLPX-203ENST00000558958 FAM104AQ969W3 186 aa12.33□□□□□ -0.44
CLPX-203ENST00000558958 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
CLPX-203ENST00000558958 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
CLPX-203ENST00000558958 A0A087WX48 190 aa12.32□□□□□ -0.44
CLPX-203ENST00000558958 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
CLPX-203ENST00000558958 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
CLPX-203ENST00000558958 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
CLPX-203ENST00000558958 Q8N3U1 123 aa12.32□□□□□ -0.44
CLPX-203ENST00000558958 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms