RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 A8MWL6 223 aa8.17□□□□□ -1.1
SMAD3-208ENST00000558827 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
SMAD3-208ENST00000558827 GAS8-AS1O95177 125 aa8.17□□□□□ -1.1
SMAD3-208ENST00000558827 AMTP48728 403 aa8.17□□□□□ -1.1
SMAD3-208ENST00000558827 FAM210AQ96ND0 272 aa8.17□□□□□ -1.1
SMAD3-208ENST00000558827 UBE2L6O14933 153 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 PKIAP61925 76 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 REG3AQ06141 175 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 COTL1Q14019 142 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 MIAQ16674 131 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 CNFNQ9BYD5 112 aa8.16□□□□□ -1.1
SMAD3-208ENST00000558827 C9JQL5 133 aa8.15□□□□□ -1.1
SMAD3-208ENST00000558827 PRSS1P07477 247 aa8.15□□□□□ -1.1
SMAD3-208ENST00000558827 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
SMAD3-208ENST00000558827 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
SMAD3-208ENST00000558827 PRR34Q9NV39 138 aa8.15□□□□□ -1.1
SMAD3-208ENST00000558827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-208ENST00000558827 IGKV2-29A2NJV5 120 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-208ENST00000558827 RAB14P61106 215 aa8.14□□□□□ -1.11
SMAD3-208ENST00000558827 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
SMAD3-208ENST00000558827 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 RNASEKQ6P5S7 137 aaKnown RBP8.13□□□□□ -1.11
SMAD3-208ENST00000558827 Q6ZSA8 131 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
SMAD3-208ENST00000558827 SDHAF1A6NFY7 115 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 PMCHP20382 165 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 ADIRFQ15847 76 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
SMAD3-208ENST00000558827 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 NCR2O95944 276 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
SMAD3-208ENST00000558827 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
SMAD3-208ENST00000558827 CT83Q5H943 113 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 V9GYV3 84 aa8.11□□□□□ -1.11
SMAD3-208ENST00000558827 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-208ENST00000558827 A0A1B0GUV1 79 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 GAGE12HA6NDE8 117 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 APCSP02743 223 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 ISOC2Q96AB3 205 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
SMAD3-208ENST00000558827 HERC1Q15751 4861 aa8.09□□□□□ -1.11
SMAD3-208ENST00000558827 FAM231BA6NCW3 169 aa8.09□□□□□ -1.11
SMAD3-208ENST00000558827 RAB4AP20338 218 aa8.09□□□□□ -1.11
SMAD3-208ENST00000558827 ST20Q9HBF5 79 aa8.09□□□□□ -1.11
SMAD3-208ENST00000558827 PANO1I0J062 215 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 I3L3M4 83 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 TSHBP01222 138 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 FGF6P10767 208 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 RIGQ13278 110 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 PEA15Q15121 130 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
SMAD3-208ENST00000558827 TRAV8-4A0A0B4J246 113 aa8.07□□□□□ -1.12
SMAD3-208ENST00000558827 SLPIP03973 132 aa8.07□□□□□ -1.12
SMAD3-208ENST00000558827 CAMPP49913 170 aa8.07□□□□□ -1.12
SMAD3-208ENST00000558827 HIGD2BQ4VC39 106 aa8.07□□□□□ -1.12
SMAD3-208ENST00000558827 NAT8Q9UHE5 227 aa8.07□□□□□ -1.12
SMAD3-208ENST00000558827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-208ENST00000558827 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
SMAD3-208ENST00000558827 NDUFS6O75380 124 aaKnown RBP8.06□□□□□ -1.12
SMAD3-208ENST00000558827 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
SMAD3-208ENST00000558827 FAM74A3Q4VXF1 159 aa8.06□□□□□ -1.12
SMAD3-208ENST00000558827 CLLU1Q5K131 121 aa8.06□□□□□ -1.12
SMAD3-208ENST00000558827 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
SMAD3-208ENST00000558827 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
SMAD3-208ENST00000558827 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-208ENST00000558827 POLR2KP53803 58 aaKnown RBP8.05□□□□□ -1.12
SMAD3-208ENST00000558827 IFITM2Q01629 132 aa8.05□□□□□ -1.12
SMAD3-208ENST00000558827 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
SMAD3-208ENST00000558827 SMDT1Q9H4I9 107 aa8.05□□□□□ -1.12
SMAD3-208ENST00000558827 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
SMAD3-208ENST00000558827 NAT8BQ9UHF3 227 aa8.05□□□□□ -1.12
SMAD3-208ENST00000558827 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 ESDP10768 282 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 XCL1P47992 114 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 MRPL51Q4U2R6 128 aaKnown RBP8.04□□□□□ -1.12
SMAD3-208ENST00000558827 MRPL54Q6P161 138 aaKnown RBP8.04□□□□□ -1.12
SMAD3-208ENST00000558827 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 C15orf56Q8N910 161 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 CLRN3Q8NCR9 226 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 LINC00526Q96FQ7 95 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 MRAP2Q96G30 205 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 TMEM101Q96IK0 257 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
SMAD3-208ENST00000558827 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms