RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
TPM1-210ENST00000558264 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
TPM1-210ENST00000558264 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 SCGB2A2Q13296 93 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 TMEM141Q96I45 108 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 HIST1H4GQ99525 98 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 E9PLD3 99 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 GIG44P09565 113 aaPredicted RBP7.62□□□□□ -1.19
TPM1-210ENST00000558264 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 RHOHQ15669 191 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 ZNF479Q96JC4 524 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 HIGD1BQ9P298 99 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
TPM1-210ENST00000558264 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
TPM1-210ENST00000558264 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 A0A0J9YXV3 536 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 PF4P02776 101 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 SCGB1D4Q6XE38 83 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 CEND1Q8N111 149 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 H3BRM9 83 aa7.61□□□□□ -1.19
TPM1-210ENST00000558264 RNASE8Q8TDE3 154 aaKnown RBP7.61□□□□□ -1.19
TPM1-210ENST00000558264 NSD1Q96L73 2696 aaPredicted RBP7.6□□□□□ -1.19
TPM1-210ENST00000558264 TENM1Q9UKZ4 2725 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 SPXQ9BT56 116 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 RS1O15537 224 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 VCX2Q9H322 139 aa7.6□□□□□ -1.19
TPM1-210ENST00000558264 SMIM13P0DJ93 91 aa7.59□□□□□ -1.19
TPM1-210ENST00000558264 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
TPM1-210ENST00000558264 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
TPM1-210ENST00000558264 NDUFA7O95182 113 aa7.59□□□□□ -1.19
TPM1-210ENST00000558264 CHCHD7Q9BUK0 85 aa7.59□□□□□ -1.19
TPM1-210ENST00000558264 GAGE12BA1L429 117 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 RHODO00212 210 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 GAGE7O76087 117 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 GAGE12FP0CL80 117 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 GAGE12GP0CL81 117 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 GAGE12IP0CL82 117 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 HERVK_113P61574 105 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 NBEAL2Q6ZNJ1 2754 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 TRBV7-3A0A075B6L6 115 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
TPM1-210ENST00000558264 CLUHP3Q96NS8 147 aa7.58□□□□□ -1.2
TPM1-210ENST00000558264 GAGE10A6NGK3 116 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 Q6ZUT4 128 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 TM2D2Q9BX73 214 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
TPM1-210ENST00000558264 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 EDA2RQ9HAV5 297 aa7.57□□□□□ -1.2
TPM1-210ENST00000558264 GAGE12JA6NER3 117 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 GAGE4Q13068 117 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 GAGE5Q13069 117 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 SRSF9Q13242 221 aaKnown RBP eCLIP7.56□□□□□ -1.2
TPM1-210ENST00000558264 GAGE13Q4V321 117 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 PLAC8L1A1L4L8 177 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 J3QQQ9 107 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 SLC25A29Q8N8R3 303 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 UBE2D4Q9Y2X8 147 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 ATRQ13535 2644 aa7.56□□□□□ -1.2
TPM1-210ENST00000558264 TRAV8-3A0A0A6YYJ7 113 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 A8MZ25 164 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 C12orf74Q32Q52 190 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 NDUFA11Q86Y39 141 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 PTH2Q96A98 100 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
TPM1-210ENST00000558264 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 CSNK1G2-AS1Q8NCQ2 148 aa7.55□□□□□ -1.2
TPM1-210ENST00000558264 A0A0J9YY99 117 aa7.54□□□□□ -1.2
TPM1-210ENST00000558264 K7EQD1 137 aa7.54□□□□□ -1.2
TPM1-210ENST00000558264 RRN3P1Q2M238 152 aa7.54□□□□□ -1.2
TPM1-210ENST00000558264 AMELXQ99217 191 aa7.54□□□□□ -1.2
TPM1-210ENST00000558264 K7EP34 96 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 FABP2P12104 132 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 TAL2Q16559 108 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 PYGO1Q9Y3Y4 419 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 TRAV4A0A0B4J268 109 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 APOMO95445 188 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 DGAT2L7PQ6IED9 249 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 NTM-AS1Q6ZSK4 140 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
TPM1-210ENST00000558264 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms