RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	REG3A	Q06141	175 aa		7.1	□□□□□ -1.27
HNRNPC-231	ENST00000557336	TMEM97	Q5BJF2	176 aa		7.1	□□□□□ -1.27
HNRNPC-231	ENST00000557336	SUMO4	Q6EEV6	95 aa		7.1	□□□□□ -1.27
HNRNPC-231	ENST00000557336	AP1S3	Q96PC3	154 aa		7.1	□□□□□ -1.27
HNRNPC-231	ENST00000557336	TRBV20OR9-2	A0A075B6H5	130 aa		7.09	□□□□□ -1.27
HNRNPC-231	ENST00000557336	IGHV1-24	A0A0C4DH33	117 aa		7.09	□□□□□ -1.27
HNRNPC-231	ENST00000557336	HMSD	A8MTL9	139 aa		7.09	□□□□□ -1.27
HNRNPC-231	ENST00000557336	CENPW	Q5EE01	88 aa		7.09	□□□□□ -1.27
HNRNPC-231	ENST00000557336		A0A1B0GUV1	79 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RAB19	A4D1S5	217 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	BCL2L11	O43521	198 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	PFDN1	O60925	122 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	CHTF8	P0CG12	524 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	NKX2-5	P52952	324 aa	Predicted RBP	7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RGS21	Q2M5E4	152 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	FER1L6-AS1	Q8NA97	138 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	CLRN3	Q8NCR9	226 aa		7.08	□□□□□ -1.28
HNRNPC-231	ENST00000557336	TRAV1-1	A0A0B4J248	108 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	MGP	P08493	103 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	SMIM17	P0DL12	118 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	OR2D3	Q8NGH3	330 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	TPPP3	Q9BW30	176 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336	GNG13	Q9P2W3	67 aa		7.07	□□□□□ -1.28
HNRNPC-231	ENST00000557336		A0A087WYN8	130 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	TRAV8-4	A0A0B4J246	113 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336		A0A0D9SG52	128 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	hDV102S1	A0JD36	115 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336		P01737	135 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RAB5C	P51148	216 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RASL11A	Q6T310	242 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	LYZL1	Q6UWQ5	148 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	C15orf56	Q8N910	161 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	SPACA4	Q8TDM5	124 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	PGLYRP4	Q96LB8	373 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	TMEM243	Q9BU79	118 aa		7.06	□□□□□ -1.28
HNRNPC-231	ENST00000557336	C9orf118	A6NHY6	69 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	NTF3	P20783	257 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	CACNG7	P62955	275 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336		Q6ZRU5	148 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	C9orf62	Q8N4C0	152 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	MANBAL	Q9NQG1	85 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	NIT2	Q9NQR4	276 aa		7.05	□□□□□ -1.28
HNRNPC-231	ENST00000557336	IGHV3-64	A0A075B6Q5	118 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336	KANTR	A0A1W2PQU2	76 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336		H7C1H1	209 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RPS20	P60866	119 aa	Known RBP	7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336	GATD1	Q8NB37	220 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336	KRTAP4-9	Q9BYQ8	210 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336	PLAC8	Q9NZF1	115 aa		7.04	□□□□□ -1.28
HNRNPC-231	ENST00000557336		F2Z2F3	143 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	CTRL	P40313	264 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	GNG4	P50150	75 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	SMIM12	Q96EX1	92 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	RNF185	Q96GF1	192 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	CNFN	Q9BYD5	112 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	DPH3P1	Q9H4G8	78 aa		7.03	□□□□□ -1.28
HNRNPC-231	ENST00000557336	TRAV26-2	A0A0B4J265	109 aa		7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336	GAGE12H	A6NDE8	117 aa		7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336	FOXA3	P55318	350 aa	Predicted RBP	7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336	MEF2B	Q02080	365 aa	Predicted RBP	7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336	WDR73	Q6P4I2	378 aa		7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336	KRTAP9-3	Q9BYQ3	159 aa		7.02	□□□□□ -1.29
HNRNPC-231	ENST00000557336		K7EN84	100 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	PHOX2A	O14813	284 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	IFNA1	P01562	189 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	TRGC1	P0CF51	173 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	AMT	P48728	403 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	SULT1A2	P50226	295 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	COX6A2	Q02221	97 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	COTL1	Q14019	142 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	ODF1	Q14990	250 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336		Q6ZNX1	250 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	PRSS3P2	Q8NHM4	247 aa		7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	RPL39L	Q96EH5	51 aa	Known RBP	7.01	□□□□□ -1.29
HNRNPC-231	ENST00000557336	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	PDE6D	O43924	150 aa		7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	EIF5A	P63241	154 aa	Known RBP	7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	HIGD2B	Q4VC39	106 aa		7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	GTSF1	Q8WW33	167 aa		7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	RNASE7	Q9H1E1	156 aa	Known RBP	7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	MED9	Q9NWA0	146 aa		7	□□□□□ -1.29
HNRNPC-231	ENST00000557336	XKRY2	A2RUG3	117 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	FAM231B	A6NCW3	169 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	GAS8-AS1	O95177	125 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	BCL2	P10415	239 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	RPS10	P46783	165 aa	Known RBP	6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	OCC1	Q8TAD7	63 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	DPH3	Q96FX2	82 aa		6.99	□□□□□ -1.29
HNRNPC-231	ENST00000557336	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	IGKV3OR2-268	A0A0C4DH90	116 aa		6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	UBE2L6	O14933	153 aa		6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	FOXI1	Q12951	378 aa		6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	TWIST1	Q15672	202 aa		6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336	KRTAP3-1	Q9BYR8	98 aa		6.98	□□□□□ -1.29
HNRNPC-231	ENST00000557336		A0A096LNI7	61 aa		6.97	□□□□□ -1.29
HNRNPC-231	ENST00000557336	NDUFS6	O75380	124 aa	Known RBP	6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms