RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 IMUPQ9GZP8 106 aa3.55□□□□□ -1.84
ATXN3-247ENST00000557311 HIGD1BQ9P298 99 aa3.55□□□□□ -1.84
ATXN3-247ENST00000557311 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
ATXN3-247ENST00000557311 F11RQ9Y624 299 aaKnown RBP3.55□□□□□ -1.84
ATXN3-247ENST00000557311 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 TRAV26-2A0A0B4J265 109 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 LEPROTL1O95214 131 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 HLA-DRB4P13762 266 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 HERV-K104P61576 105 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 FAM223AQ8IWN6 122 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 TMEM61Q8N0U2 210 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 CEND1Q8N111 149 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
ATXN3-247ENST00000557311 URB1-AS1Q96HZ7 61 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 C18orf15Q96N68 181 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 GFI1Q99684 422 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 AGPAT4-IT1Q9H0P7 198 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 HLA-DRB4X5D2U9 266 aa3.54□□□□□ -1.84
ATXN3-247ENST00000557311 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 TRAV8-1A0A0A6YYK1 113 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 IGHV1-24A0A0C4DH33 117 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 TRBV7-7A0A0K0K1E9 115 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 RTL8CO15255 209 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 IGKV1-16P04430 117 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 FGF6P10767 208 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 PQLC2Q6ZP29 291 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 NFE4Q86UQ8 179 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 MMD2Q8IY49 270 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 ABHD14BQ96IU4 210 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 MGST2Q99735 147 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 TXNDC17Q9BRA2 123 aa3.53□□□□□ -1.84
ATXN3-247ENST00000557311 NHP2Q9NX24 153 aaKnown RBP3.53□□□□□ -1.84
ATXN3-247ENST00000557311 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 TRAV12-2A0A075B6T6 113 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 ATOX1O00244 68 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 SSSCA1O60232 199 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 PDCD6O75340 191 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 IGKCP01834 107 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 IL4P05112 153 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 APELAP0DMC3 54 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 P0DMU3 169 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 FAM231AP0DMU4 169 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 FAM231CP0DMU5 169 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 MGST1P10620 155 aaKnown RBP3.52□□□□□ -1.85
ATXN3-247ENST00000557311 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 NPC2P61916 151 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 RPS11P62280 158 aaKnown RBP eCLIP3.52□□□□□ -1.85
ATXN3-247ENST00000557311 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
ATXN3-247ENST00000557311 SERF2P84101 59 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 ARFRP1Q13795 201 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 RTL8BQ17RB0 113 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 LGALS9BQ3B8N2 356 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 LINC01545Q5VT33 79 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 MAPKAPK5-AS1Q8N8E1 139 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 IL1F10Q8WWZ1 152 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 FAM3DQ96BQ1 224 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 SHANK2-AS3Q9BTD1 123 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
ATXN3-247ENST00000557311 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 Q9UF83 564 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
ATXN3-247ENST00000557311 MUC4Q99102 2169 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 KNCNA6PVL3 124 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 SRRM4A7MD48 611 aaKnown RBP3.51□□□□□ -1.85
ATXN3-247ENST00000557311 M0R2N4 97 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 BUB3O43684 328 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 PSMB2P49721 201 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-247ENST00000557311 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-247ENST00000557311 C15orf32Q32M92 178 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 C12orf74Q32Q52 190 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 ZC2HC1BQ5TFG8 222 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 ZNF493Q6ZR52 646 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 Q6ZS49 121 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 LHFPL1Q86WI0 220 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
ATXN3-247ENST00000557311 LY96Q9Y6Y9 160 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
ATXN3-247ENST00000557311 IGHV4-4A0A075B6R2 117 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 CTXND1A0A1B0GTU2 59 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 GCHFRP30047 84 aa3.5□□□□□ -1.85
ATXN3-247ENST00000557311 RPL30P62888 115 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms